RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 H2BFWTQ7Z2G1 175 aa5.54□□□□□ -1.52
USP28-206ENST00000538224 MOGAT3Q86VF5 341 aa5.54□□□□□ -1.52
USP28-206ENST00000538224 FGFRL1Q8N441 504 aa5.54□□□□□ -1.52
USP28-206ENST00000538224 ZNF808Q8N4W9 903 aaPredicted RBP5.54□□□□□ -1.52
USP28-206ENST00000538224 TMEM217Q8N7C4 229 aa5.54□□□□□ -1.52
USP28-206ENST00000538224 OR52L2PQ8NGH6 319 aa5.54□□□□□ -1.52
USP28-206ENST00000538224 OR13A1Q8NGR1 328 aa5.54□□□□□ -1.52
USP28-206ENST00000538224 SVIPQ8NHG7 77 aa5.54□□□□□ -1.52
USP28-206ENST00000538224 ITLN1Q8WWA0 313 aa5.54□□□□□ -1.52
USP28-206ENST00000538224 SDSLQ96GA7 329 aa5.54□□□□□ -1.52
USP28-206ENST00000538224 ADTRPQ96IZ2 230 aa5.54□□□□□ -1.52
USP28-206ENST00000538224 LRFN3Q9BTN0 628 aa5.54□□□□□ -1.52
USP28-206ENST00000538224 SMCO4Q9NRQ5 59 aa5.54□□□□□ -1.52
USP28-206ENST00000538224 GNG12Q9UBI6 72 aa5.54□□□□□ -1.52
USP28-206ENST00000538224 GAB2Q9UQC2 676 aa5.54□□□□□ -1.52
USP28-206ENST00000538224 EP300Q09472 2414 aaPredicted RBP5.54□□□□□ -1.52
USP28-206ENST00000538224 KIAA2026Q5HYC2 2103 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 TRGV10A0A0A0MS01 117 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 RBFOX3A6NFN3 312 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 FAM74A7A6NL05 159 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 ZNF729A6NN14 1252 aaPredicted RBP5.53□□□□□ -1.52
USP28-206ENST00000538224 H3BP45 60 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 ST8SIA5O15466 376 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 PPIHO43447 177 aaKnown RBP5.53□□□□□ -1.52
USP28-206ENST00000538224 SPRY3O43610 288 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 GATCO43716 136 aaKnown RBP5.53□□□□□ -1.52
USP28-206ENST00000538224 NDUFS6O75380 124 aaKnown RBP5.53□□□□□ -1.52
USP28-206ENST00000538224 S1PR2O95136 353 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 HPRT1P00492 218 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 HSPB1P04792 205 aaKnown RBP5.53□□□□□ -1.52
USP28-206ENST00000538224 METTL15P1P0C7V9 234 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 IAPPP10997 89 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 EGR1P18146 543 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 BMP5P22003 454 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 THBS3P49746 956 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 SRSF3P84103 164 aaKnown RBP5.53□□□□□ -1.52
USP28-206ENST00000538224 SLC38A11Q08AI6 406 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 TMEM267Q0VDI3 215 aaPredicted RBP5.53□□□□□ -1.52
USP28-206ENST00000538224 ZNF816Q0VGE8 651 aaPredicted RBP5.53□□□□□ -1.52
USP28-206ENST00000538224 EDDM3AQ14507 147 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 LRRC75BQ2VPJ9 315 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 AARDQ4LEZ3 155 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 FAM74A3Q4VXF1 159 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 KHDC3LQ587J8 217 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 STUMQ69YW2 141 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 TMEM14EPQ6UXP3 125 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 GFRALQ6UXV0 394 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 ODF3L1Q8IXM7 274 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 C1orf87Q8N0U7 546 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 ZNF525Q8N782 197 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 C15orf54Q8N8G6 183 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 OR10G4Q8NGN3 311 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 UBALD1Q8TB05 177 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 ABHD17AQ96GS6 310 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 TMEM147Q9BVK8 224 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 MRPL37Q9BZE1 423 aaKnown RBP5.53□□□□□ -1.52
USP28-206ENST00000538224 PARP12Q9H0J9 701 aaKnown RBP5.53□□□□□ -1.52
USP28-206ENST00000538224 RBKSQ9H477 322 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 ZNF665Q9H7R5 613 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 CALYQ9NYX4 217 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 PLA2G2EQ9NZK7 142 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 METRNQ9UJH8 293 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 PSG11Q9UQ72 335 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 TP53TG5Q9Y2B4 290 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 ZNF835Q9Y2P0 537 aa5.53□□□□□ -1.52
USP28-206ENST00000538224 CNOT1A5YKK6 2376 aaKnown RBP5.52□□□□□ -1.53
USP28-206ENST00000538224 ARID1AO14497 2285 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 MARCH11A6NNE9 402 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 CEBPZOSA8MTT3 80 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 C17orf112F2Z3M2 114 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 K7ENP7 123 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 RBMXL2O75526 392 aaKnown RBP5.52□□□□□ -1.53
USP28-206ENST00000538224 NXPH3O95157 252 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 KRASP01116 189 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 IGHV1-46P01743 117 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 DUTP33316 252 aaKnown RBP5.52□□□□□ -1.53
USP28-206ENST00000538224 G6PCP35575 357 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 NPBWR1P48145 328 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 EDDM3BP56851 147 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 MEF2CQ06413 473 aaPredicted RBP5.52□□□□□ -1.53
USP28-206ENST00000538224 PMS2P11Q13670 270 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 HFEQ30201 348 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 MORN2Q502X0 79 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 TMEM41BQ5BJD5 291 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 SOHLH1Q5JUK2 328 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 ZNF506Q5JVG8 444 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 SPANXN5Q5MJ07 72 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 PRAMEF5Q5TYX0 476 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 TEX36Q5VZQ5 186 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 ALKBH2Q6NS38 261 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 VHLLQ6RSH7 139 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 Q6ZRM9 215 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 CENPVQ7Z7K6 275 aaPredicted RBP5.52□□□□□ -1.53
USP28-206ENST00000538224 LRP11Q86VZ4 500 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 THNSL2Q86YJ6 484 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 DOLPP1Q86YN1 238 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 SPACA3Q8IXA5 215 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 ZNF295-AS1Q8N0V1 137 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 RPRMLQ8N4K4 120 aa5.52□□□□□ -1.53
USP28-206ENST00000538224 OR10P1Q8NGE3 313 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms