RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 GPR12P47775 334 aa7.31□□□□□ -1.24
UBE3B-208ENST00000538070 SULT1A1P50225 295 aa7.31□□□□□ -1.24
UBE3B-208ENST00000538070 RAB2AP61019 212 aa7.31□□□□□ -1.24
UBE3B-208ENST00000538070 HFEQ30201 348 aa7.31□□□□□ -1.24
UBE3B-208ENST00000538070 RPL39P5Q59GN2 51 aa7.31□□□□□ -1.24
UBE3B-208ENST00000538070 DUX4L9Q6RFH8 374 aaPredicted RBP7.31□□□□□ -1.24
UBE3B-208ENST00000538070 ITLN1Q8WWA0 313 aa7.31□□□□□ -1.24
UBE3B-208ENST00000538070 TMPRSS5Q9H3S3 457 aa7.31□□□□□ -1.24
UBE3B-208ENST00000538070 STRAPQ9Y3F4 350 aaKnown RBP7.31□□□□□ -1.24
UBE3B-208ENST00000538070 IQCF6A8MYZ5 107 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 SLC38A11Q08AI6 406 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 MSMPQ1L6U9 139 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 ZNF787Q6DD87 383 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 RBKSQ9H477 322 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 NDRG3Q9UGV2 375 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 K7N7A8 449 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 OR2C1O95371 312 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 CYB5R3P00387 301 aaPredicted RBP7.3□□□□□ -1.24
UBE3B-208ENST00000538070 IFNA10P01566 189 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 PDZD11Q5EBL8 140 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 TGIF2LYQ8IUE0 185 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 NECAP1Q8NC96 275 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 Q8NFD4 153 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 SLC39A9Q9NUM3 307 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 AURKAIP1Q9NWT8 199 aaPredicted RBP7.3□□□□□ -1.24
UBE3B-208ENST00000538070 DCAF16Q9NXF7 216 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 A0A1B0GU03 582 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 ZNF891A8MT65 544 aaPredicted RBP7.3□□□□□ -1.24
UBE3B-208ENST00000538070 NDUFB7P17568 137 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 MDH2P40926 338 aaKnown RBP7.3□□□□□ -1.24
UBE3B-208ENST00000538070 RAB13P51153 203 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 RAB5BP61020 215 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 PRB3Q04118 309 aaPredicted RBP7.3□□□□□ -1.24
UBE3B-208ENST00000538070 TLE4Q04727 773 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 FOXC1Q12948 553 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 CATR1Q13166 79 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 KIAA0141Q14154 515 aaPredicted RBP7.3□□□□□ -1.24
UBE3B-208ENST00000538070 C4orf17Q53FE4 359 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 DHRS7BQ6IAN0 325 aaPredicted RBP7.3□□□□□ -1.24
UBE3B-208ENST00000538070 ZNF429Q86V71 674 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 ODF3L1Q8IXM7 274 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 CD177Q8N6Q3 437 aa7.3□□□□□ -1.24
UBE3B-208ENST00000538070 RPUSD4Q96CM3 377 aaKnown RBP7.3□□□□□ -1.24
UBE3B-208ENST00000538070 GNPNAT1Q96EK6 184 aaPredicted RBP7.3□□□□□ -1.24
UBE3B-208ENST00000538070 ZZEF1O43149 2961 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 H3BQ15 152 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 DFFBO76075 338 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 IGLV2-14P01704 120 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 NQO2P16083 231 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 CTRB1P17538 263 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 HBG1P69891 147 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 HBG2P69892 147 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 FLI1Q01543 452 aaPredicted RBP7.29□□□□□ -1.24
UBE3B-208ENST00000538070 UTF1Q5T230 341 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 PRAMEF5Q5TYX0 476 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 CTRB2Q6GPI1 263 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 LINC00596Q86U02 117 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 C11orf53Q8IXP5 236 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 LHX4Q969G2 390 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 SNRNP40Q96DI7 357 aaKnown RBP7.29□□□□□ -1.24
UBE3B-208ENST00000538070 RAB40CQ96S21 281 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 ZNRD1Q9P1U0 126 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 WASF3Q9UPY6 502 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 PRELID3BQ9Y3B1 194 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 WIPI2Q9Y4P8 454 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 ODAMA1E959 279 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 OOEPA6NGQ2 149 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 LINC00473A8K010 186 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 UBE2G2P60604 165 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 NCR3LG1Q68D85 454 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 ZNF474Q6S9Z5 364 aaPredicted RBP7.29□□□□□ -1.24
UBE3B-208ENST00000538070 MOB1BQ7L9L4 216 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 PIP4P1Q86T03 277 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 CCL13Q99616 98 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 TMEM204Q9BSN7 226 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 HEYLQ9NQ87 328 aaPredicted RBP7.29□□□□□ -1.24
UBE3B-208ENST00000538070 DKK4Q9UBT3 224 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 RNF115Q9Y4L5 304 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 PRSS47A8MTI9 375 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 AQP7O14520 342 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 TNFSF13O75888 250 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 FGF7P21781 194 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 EIF2S3P41091 472 aaKnown RBP7.29□□□□□ -1.24
UBE3B-208ENST00000538070 RAB5CP51148 216 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 TAS2R30P59541 319 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 ERVK11-1P61568 191 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 ZNF146Q15072 292 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 MSMO1Q15800 293 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 C22orf34Q6ZV56 151 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 ZNF709Q8N972 641 aa7.29□□□□□ -1.24
UBE3B-208ENST00000538070 RNF212BA8MTL3 300 aa7.28□□□□□ -1.24
UBE3B-208ENST00000538070 TM4SF5O14894 197 aa7.28□□□□□ -1.24
UBE3B-208ENST00000538070 IGHG3P01860 377 aa7.28□□□□□ -1.24
UBE3B-208ENST00000538070 KLF3P57682 345 aaPredicted RBP7.28□□□□□ -1.24
UBE3B-208ENST00000538070 SELENOVP59797 346 aa7.28□□□□□ -1.24
UBE3B-208ENST00000538070 HIST1H2BAQ96A08 127 aa7.28□□□□□ -1.24
UBE3B-208ENST00000538070 RAB39BQ96DA2 213 aa7.28□□□□□ -1.24
UBE3B-208ENST00000538070 GFOD1Q9NXC2 390 aa7.28□□□□□ -1.24
UBE3B-208ENST00000538070 PLXNB1O43157 2135 aa7.28□□□□□ -1.24
UBE3B-208ENST00000538070 PRSS44E7EML9 344 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms