RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 C5orf64Q2M2E5 130 aa13.51□□□□□ -0.25
SFSWAP-205ENST00000537164 CDNFQ49AH0 187 aa13.51□□□□□ -0.25
SFSWAP-205ENST00000537164 IGSF11Q5DX21 431 aa13.51□□□□□ -0.25
SFSWAP-205ENST00000537164 HACD4Q5VWC8 232 aa13.51□□□□□ -0.25
SFSWAP-205ENST00000537164 FAM131AQ6UXB0 335 aa13.51□□□□□ -0.25
SFSWAP-205ENST00000537164 C1QL4Q86Z23 238 aa13.51□□□□□ -0.25
SFSWAP-205ENST00000537164 ZNF107Q9UII5 783 aaPredicted RBP13.51□□□□□ -0.25
SFSWAP-205ENST00000537164 A0A075B6Q4 140 aa13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 A0A087WXM4 84 aa13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 IGHG4P01861 327 aa13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 GSTP1P09211 210 aaKnown RBP13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 CLEC2LP0C7M8 214 aa13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 SNRPBP14678 240 aaKnown RBP13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 FOXE3Q13461 319 aa13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 ARFRP1Q13795 201 aa13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 TIMM50Q3ZCQ8 353 aa13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 TSPAN14Q8NG11 270 aa13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 OR10J5Q8NHC4 309 aa13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 LGALS14Q8TCE9 139 aa13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 DCSTAMPQ9H295 470 aa13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 ZNF230Q9UIE0 474 aaPredicted RBP13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 ZNF221Q9UK13 617 aa13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 ELF5Q9UKW6 265 aaPredicted RBP13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 WASHC3Q9Y3C0 194 aa13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 ETV7Q9Y603 341 aa13.5□□□□□ -0.25
SFSWAP-205ENST00000537164 IGHV7-81A0A0B4J1V7 117 aa13.49□□□□□ -0.25
SFSWAP-205ENST00000537164 LOC100506127A0A0U1RQW1 187 aa13.49□□□□□ -0.25
SFSWAP-205ENST00000537164 BET1O15155 118 aa13.49□□□□□ -0.25
SFSWAP-205ENST00000537164 ELANEP08246 267 aa13.49□□□□□ -0.25
SFSWAP-205ENST00000537164 OR5H8P0DN80 308 aa13.49□□□□□ -0.25
SFSWAP-205ENST00000537164 TALDO1P37837 337 aa13.49□□□□□ -0.25
SFSWAP-205ENST00000537164 PITPNAQ00169 270 aa13.49□□□□□ -0.25
SFSWAP-205ENST00000537164 MXD1Q05195 221 aa13.49□□□□□ -0.25
SFSWAP-205ENST00000537164 ZNF260Q3ZCT1 412 aa13.49□□□□□ -0.25
SFSWAP-205ENST00000537164 GLDNQ6ZMI3 551 aaPredicted RBP13.49□□□□□ -0.25
SFSWAP-205ENST00000537164 ETV3LQ6ZN32 361 aa13.49□□□□□ -0.25
SFSWAP-205ENST00000537164 OR51J1Q9H342 316 aa13.49□□□□□ -0.25
SFSWAP-205ENST00000537164 RHBDL2Q9NX52 303 aa13.49□□□□□ -0.25
SFSWAP-205ENST00000537164 RNF150Q9ULK6 438 aa13.49□□□□□ -0.25
SFSWAP-205ENST00000537164 IGKV1D-8A0A087WSZ0 117 aa13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 RRHO14718 337 aa13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 PF4P02776 101 aa13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 TFAP2AP05549 437 aa13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 CD33P20138 364 aa13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 PSMB8P28062 276 aa13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 PPIFP30405 207 aaKnown RBP13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 CRIP2P52943 208 aaPredicted RBP13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 OXLD1Q5BKU9 147 aa13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 KHDC1LQ5JSQ8 128 aa13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 LIN54Q6MZP7 749 aa13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 ZNF383Q8NA42 475 aa13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 MAFIPQ8WZ33 124 aa13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 SLC25A38Q96DW6 304 aa13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 YIPF6Q96EC8 236 aa13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 VCX3AQ9NNX9 186 aa13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 KIAA1456Q9P272 454 aa13.48□□□□□ -0.25
SFSWAP-205ENST00000537164 A0A0A6YYH2 397 aa13.47□□□□□ -0.25
SFSWAP-205ENST00000537164 A6NJ64 397 aa13.47□□□□□ -0.25
SFSWAP-205ENST00000537164 VDAC1P21796 283 aa13.47□□□□□ -0.25
SFSWAP-205ENST00000537164 CDX1P47902 265 aaPredicted RBP13.47□□□□□ -0.25
SFSWAP-205ENST00000537164 THBS3P49746 956 aa13.47□□□□□ -0.25
SFSWAP-205ENST00000537164 PDPNQ86YL7 162 aa13.47□□□□□ -0.25
SFSWAP-205ENST00000537164 CROCCP3Q8IVE0 287 aa13.47□□□□□ -0.25
SFSWAP-205ENST00000537164 ZNF695Q8IW36 515 aa13.47□□□□□ -0.25
SFSWAP-205ENST00000537164 H1FOOQ8IZA3 346 aaPredicted RBP13.47□□□□□ -0.25
SFSWAP-205ENST00000537164 LINC00482Q8N8I6 264 aa13.47□□□□□ -0.25
SFSWAP-205ENST00000537164 DRAXINQ8NBI3 349 aaPredicted RBP13.47□□□□□ -0.25
SFSWAP-205ENST00000537164 OR5H6Q8NGV6 325 aa13.47□□□□□ -0.25
SFSWAP-205ENST00000537164 MYOZ3Q8TDC0 251 aa13.47□□□□□ -0.25
SFSWAP-205ENST00000537164 TMEM235A6NFC5 223 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 H7C2Y5 167 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 ATP6V0E1O15342 81 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 SPDEFO95238 335 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 IGLV1-40P01703 118 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 IGKV1-16P04430 117 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 RPLP1P05386 114 aaKnown RBP13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 CTXN2P0C2S0 81 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 OR8U9P0C7N5 309 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 LINC00205P59089 165 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 TAGLNQ01995 201 aaKnown RBP13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 C19orf54Q5BKX5 351 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 CXorf66Q5JRM2 361 aaPredicted RBP13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 IDNKQ5T6J7 187 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 ZNF660Q6AZW8 331 aaPredicted RBP13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 C18orf65Q6ZTR6 163 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 OR8U1Q8NH10 309 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 RCC1LQ96I51 464 aaKnown RBP13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 P2RX4Q99571 388 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 OR2D2Q9H210 308 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 SDHAF2Q9NX18 166 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 SPATA2Q9UM82 520 aa13.46□□□□□ -0.25
SFSWAP-205ENST00000537164 AIREO43918 545 aa13.45□□□□□ -0.26
SFSWAP-205ENST00000537164 SSX5O60225 188 aa13.45□□□□□ -0.26
SFSWAP-205ENST00000537164 DUS4LO95620 317 aaKnown RBP13.45□□□□□ -0.26
SFSWAP-205ENST00000537164 MYCNOSP40205 109 aa13.45□□□□□ -0.26
SFSWAP-205ENST00000537164 C8orf86Q6ZUL3 223 aa13.45□□□□□ -0.26
SFSWAP-205ENST00000537164 REC114Q7Z4M0 266 aa13.45□□□□□ -0.26
SFSWAP-205ENST00000537164 MRPL41Q8IXM3 137 aaKnown RBP13.45□□□□□ -0.26
SFSWAP-205ENST00000537164 MINDY2Q8NBR6 621 aa13.45□□□□□ -0.26
SFSWAP-205ENST00000537164 KLHL30-AS1Q8NEE0 82 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms