RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 FAM157AC9JC47 383 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 F5H0A9 414 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-208ENST00000537004 TNFSF12O43508 249 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 CFHR2P36980 270 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 B2MP61769 119 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 TNFAIP6P98066 277 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-208ENST00000537004 ZNF273Q14593 569 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 MOGAT3Q86VF5 341 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 CD177Q8N6Q3 437 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 BVESQ8NE79 360 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 OR10V1Q8NGI7 309 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 ITLN1Q8WWA0 313 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 TMEM56Q96MV1 263 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 AQP10Q96PS8 301 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 DNAJB11Q9UBS4 358 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 TMED3Q9Y3Q3 217 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 TMEM56-RWDD3S4R434 201 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 PGLYRP1O75594 196 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-208ENST00000537004 DEDDO75618 318 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 SCGB1D2O95969 90 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 NMBP08949 121 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 PSG2P11465 335 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 S100GP29377 79 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 PRDX2P32119 198 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 GABRA2P47869 451 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 BTN1A1Q13410 526 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 SMCO1Q147U7 214 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 HFEQ30201 348 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 FAM90A1Q86YD7 464 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 GCSAMQ8N6F7 178 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 BOLLQ8N9W6 283 aaKnown RBP9.87□□□□□ -0.83
CLIP1-208ENST00000537004 ZDHHC8Q9ULC8 765 aa9.87□□□□□ -0.83
CLIP1-208ENST00000537004 LSM5Q9Y4Y9 91 aaKnown RBP9.87□□□□□ -0.83
CLIP1-208ENST00000537004 STAB1Q9NY15 2570 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 IGKV1D-17A0A075B6S4 117 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 MFSD2BA6NFX1 497 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 OOEPA6NGQ2 149 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 C12orf77C9JDV5 145 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 H0Y980 276 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 CDS2O95674 445 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 MBPP02686 304 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-208ENST00000537004 ADH4P08319 380 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 UCP1P25874 307 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 CEACAM6P40199 344 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 GATA4P43694 442 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 LMO4P61968 165 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 KRTAP21-3Q3LHN1 58 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 KRBOX4Q5JUW0 171 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 ZNF695Q8IW36 515 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 LINC00518Q8N0U6 118 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 OR52M1Q8NGK5 317 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 OR1L1Q8NH94 360 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 PARP12Q9H0J9 701 aaKnown RBP9.86□□□□□ -0.83
CLIP1-208ENST00000537004 DNTTIP1Q9H147 329 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 KCNS2Q9ULS6 477 aa9.86□□□□□ -0.83
CLIP1-208ENST00000537004 F2RP25116 425 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 GLIPR1P48060 266 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 FAM120AOSQ5T036 256 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 SELENOHQ8IZQ5 122 aaKnown RBP9.85□□□□□ -0.83
CLIP1-208ENST00000537004 GALMQ96C23 342 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 PHYHIPLQ96FC7 376 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 EGLN1Q9GZT9 426 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 SDHAF2Q9NX18 166 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 RBM7Q9Y580 266 aaKnown RBP9.85□□□□□ -0.83
CLIP1-208ENST00000537004 IGHV3OR15-7A0A075B7D8 119 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 K7EPK0 472 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 ZNF737O75373 536 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 LHBP01229 141 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 IGLV2-14P01704 120 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 CD55P08174 381 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 PAX5Q02548 391 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 TUSC1Q2TAM9 212 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 FAM71E2Q8N5Q1 922 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 TPRX1Q8N7U7 411 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 LINC01356Q8N9X3 169 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 OR5D13Q8NGL4 314 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 OR51H1Q8NH63 302 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 STOML3Q8TAV4 291 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 MRGPRDQ8TDS7 321 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 ZMAT5Q9UDW3 170 aaKnown RBP9.85□□□□□ -0.83
CLIP1-208ENST00000537004 IL19Q9UHD0 177 aa9.85□□□□□ -0.83
CLIP1-208ENST00000537004 DUXBA0A1W2PPF3 345 aa9.84□□□□□ -0.83
CLIP1-208ENST00000537004 HBZP02008 142 aa9.84□□□□□ -0.83
CLIP1-208ENST00000537004 OR8U9P0C7N5 309 aa9.84□□□□□ -0.83
CLIP1-208ENST00000537004 HKR1P10072 659 aa9.84□□□□□ -0.83
CLIP1-208ENST00000537004 TNFSF4P23510 183 aa9.84□□□□□ -0.83
CLIP1-208ENST00000537004 RPL12P30050 165 aaKnown RBP9.84□□□□□ -0.83
CLIP1-208ENST00000537004 CR1LQ2VPA4 569 aa9.84□□□□□ -0.83
CLIP1-208ENST00000537004 OR13A1Q8NGR1 328 aa9.84□□□□□ -0.83
CLIP1-208ENST00000537004 OR8U1Q8NH10 309 aa9.84□□□□□ -0.83
CLIP1-208ENST00000537004 AKR1E2Q96JD6 320 aa9.84□□□□□ -0.83
CLIP1-208ENST00000537004 CXorf58Q96LI9 332 aa9.84□□□□□ -0.83
CLIP1-208ENST00000537004 LINC00052Q96N35 136 aa9.84□□□□□ -0.83
CLIP1-208ENST00000537004 SLC25A32Q9H2D1 315 aa9.84□□□□□ -0.83
CLIP1-208ENST00000537004 SEBOXQ9HB31 216 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-208ENST00000537004 GCM1Q9NP62 436 aa9.84□□□□□ -0.83
CLIP1-208ENST00000537004 CYTL1Q9NRR1 136 aa9.84□□□□□ -0.83
CLIP1-208ENST00000537004 ZFP57Q9NU63 452 aa9.84□□□□□ -0.83
CLIP1-208ENST00000537004 TMEM106BQ9NUM4 274 aa9.84□□□□□ -0.83
CLIP1-208ENST00000537004 CDC42EP3Q9UKI2 254 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms