RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 TSEN54Q7Z6J9 526 aaKnown RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 SLC25A42Q86VD7 318 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 ZDHHC22Q8N966 263 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 FADS6Q8N9I5 356 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 LRRC75AQ8NAA5 344 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 TMEM229BQ8NBD8 167 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 OR2T33Q8NG76 320 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 OR51T1Q8NGJ9 327 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 OR4C16Q8NGL9 310 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 OR6T1Q8NGN1 323 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 OR10S1Q8NGN2 331 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 OR10Q1Q8NGQ4 319 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 OR13G1Q8NGZ3 307 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 JOSD2Q8TAC2 188 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 KCNG3Q8TAE7 436 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 PTPMT1Q8WUK0 201 aaPredicted RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 CRYGNQ8WXF5 182 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 AQP3Q92482 292 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 NRGNQ92686 78 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 DAZLQ92904 295 aaKnown RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 RAB8BQ92930 207 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 IL22RA2Q969J5 263 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 ESAMQ96AP7 390 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 STARD4Q96DR4 205 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 RBMXL1Q96E39 390 aaKnown RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 GRAMD2BQ96HH9 432 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 GMPPAQ96IJ6 420 aaPredicted RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 SEC22AQ96IW7 307 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 AP1S3Q96PC3 154 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 TBX5Q99593 518 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 GPA33Q99795 319 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 SNRNP25Q9BV90 132 aaKnown RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 NMNAT2Q9BZQ4 307 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 TMEM126AQ9H061 195 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 POLR2J3Q9H1A7 115 aaKnown RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 LPAR5Q9H1C0 372 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 GTSF1LQ9H1H1 148 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 SLC25A18Q9H1K4 315 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 AKIRIN1Q9H9L7 192 aaPredicted RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 LYRM4Q9HD34 91 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 Q9N2K0 584 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 RAB9BQ9NP90 201 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 PXMP2Q9NR77 195 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 MED29Q9NX70 200 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 TVP23BQ9NYZ1 205 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 KCNIP1Q9NZI2 227 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 MARCH4Q9P2E8 410 aaPredicted RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 ONECUT1Q9UBC0 465 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 KLK11Q9UBX7 282 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 NAT8BQ9UHF3 227 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 VPREB3Q9UKI3 123 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 KLK13Q9UKR3 277 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 CYSLTR1Q9Y271 337 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 MRPS33Q9Y291 106 aaKnown RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 NOP16Q9Y3C1 178 aaKnown RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 WDR45Q9Y484 360 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 PPIAL4AQ9Y536 164 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 TECPR2O15040 1411 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 NHSQ6T4R5 1651 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 A0A087WX48 190 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 A0A1W2PQM1 296 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 hADV38S2A0JD32 116 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 ODAMA1E959 279 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 LRP5LA4QPB2 252 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 OR51F1A6NGY5 319 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 SMIM9A6NGZ8 99 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 OR2T8A6NH00 312 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 J3QRE1 110 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 K7EP34 96 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 DEGS1O15121 323 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 XRCC2O43543 280 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 PSMD10O75832 226 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 TRAPPC6AO75865 159 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 CEACAM4O75871 244 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 CLDN1O95832 211 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 CYB5AP00167 134 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 HLA-AP01891 365 aaKnown RBP2.05□□□□□ -2.08
SKA3-207ENST00000536239 PRH1P02810 166 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 IFNW1P05000 195 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 SERPINE2P07093 398 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 CEBPBP17676 345 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 ACP1P24666 158 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 NPY1RP25929 384 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 HOXC9P31274 260 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 BSGP35613 385 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 FRKP42685 505 aaPredicted RBP2.05□□□□□ -2.08
SKA3-207ENST00000536239 KIR2DS4P43632 304 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 OR3A4PP47883 348 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 UCNP55089 124 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 SNU13P55769 128 aaKnown RBP2.05□□□□□ -2.08
SKA3-207ENST00000536239 TCL1AP56279 114 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 YPEL3P61236 119 aaPredicted RBP2.05□□□□□ -2.08
SKA3-207ENST00000536239 RPS14P62263 151 aaKnown RBP2.05□□□□□ -2.08
SKA3-207ENST00000536239 SEC11AP67812 179 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 SIRPAP78324 504 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 FUT7Q11130 342 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 ELAVL3Q14576 367 aaKnown RBP2.05□□□□□ -2.08
SKA3-207ENST00000536239 ZNF266Q14584 549 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 EXOSC7Q15024 291 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms