RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 IGHV3-72A0A0B4J1Y9 119 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 RNF212BA8MTL3 300 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 TXNL1O43396 289 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 PROP1O75360 226 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 TUSC2O75896 110 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 IL18Q14116 193 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 CDK10Q15131 360 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 THNSL2Q86YJ6 484 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 OR6Q1Q8NGQ2 317 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 CAPSLQ8WWF8 208 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 S1PR3Q99500 378 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 MDFIQ99750 246 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 C19orf24Q9BVV8 132 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 MRPL20Q9BYC9 149 aaKnown RBP9.67□□□□□ -0.86
CHD4-203ENST00000535717 GHITMQ9H3K2 345 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 NECAP2Q9NVZ3 263 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 KLK11Q9UBX7 282 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 OR2W1Q9Y3N9 320 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 STAB1Q9NY15 2570 aa9.67□□□□□ -0.86
CHD4-203ENST00000535717 FABP12A6NFH5 140 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 ZNF736B4DX44 427 aaPredicted RBP9.66□□□□□ -0.86
CHD4-203ENST00000535717 GABARAPH6UMI1 98 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 PMP2P02689 132 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 SNRNP70P08621 437 aaKnown RBP9.66□□□□□ -0.86
CHD4-203ENST00000535717 FAM106CPP0CH98 169 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 OR5H8P0DN80 308 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 HLA-DMAP28067 261 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 FCGR2CP31995 323 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 S100A5P33763 92 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 RCVRNP35243 200 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 GPR12P47775 334 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 RFX2P48378 723 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 PPP5CP53041 499 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 TAS2R46P59540 309 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 DGCR2P98153 550 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 RELBQ01201 579 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 PYHIN1Q6K0P9 492 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 FAM71F2Q6NXP2 309 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 LIAT1Q6ZQX7 453 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 GRPEL2Q8TAA5 225 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 FCAMRQ8WWV6 532 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 RBMXL1Q96E39 390 aaKnown RBP9.66□□□□□ -0.86
CHD4-203ENST00000535717 C5orf30Q96GV9 206 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 NABP2Q9BQ15 211 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 OR2D2Q9H210 308 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 C1RLQ9NZP8 487 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 RABL2AQ9UBK7 228 aaPredicted RBP9.66□□□□□ -0.86
CHD4-203ENST00000535717 MTFP1Q9UDX5 166 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 ZNF221Q9UK13 617 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 PITPNC1Q9UKF7 332 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 RABL2BQ9UNT1 228 aa9.66□□□□□ -0.86
CHD4-203ENST00000535717 IGKV1D-13A0A0B4J2D9 117 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 CTDSPLO15194 276 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 UPK1BO75841 260 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 RBBP9O75884 186 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 IGKV1D-33P01593 117 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 IGKV1-33P01594 117 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 CRYBA1P05813 215 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 CT45A6P0DMU7 189 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 CT45A5P0DMU8 189 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 CT45A7P0DMV0 189 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 IGKV1-13P0DP09 117 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 HKR1P10072 659 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 AADACP22760 399 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 CD1BP29016 333 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 HRH1P35367 487 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 LUMP51884 338 aaPredicted RBP9.65□□□□□ -0.86
CHD4-203ENST00000535717 RPL15P61313 204 aaKnown RBP9.65□□□□□ -0.86
CHD4-203ENST00000535717 ACTG1P63261 375 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 MRPS10P82664 201 aaKnown RBP9.65□□□□□ -0.86
CHD4-203ENST00000535717 EBI3Q14213 229 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 DHRS7BQ6IAN0 325 aaPredicted RBP9.65□□□□□ -0.86
CHD4-203ENST00000535717 FAM131AQ6UXB0 335 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 OVCH2Q7RTZ1 564 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 CCDC190Q86UF4 302 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.65□□□□□ -0.86
CHD4-203ENST00000535717 OR5H2Q8NGV7 314 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 SMIM4Q8WVI0 70 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 SLA2Q9H6Q3 261 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 SDHAF2Q9NX18 166 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 EHFQ9NZC4 300 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 GAB2Q9UQC2 676 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 RBM7Q9Y580 266 aaKnown RBP9.65□□□□□ -0.86
CHD4-203ENST00000535717 V9GYH0 126 aa9.65□□□□□ -0.86
CHD4-203ENST00000535717 TMEM89A2RUT3 159 aa9.64□□□□□ -0.87
CHD4-203ENST00000535717 M0R1X1 148 aa9.64□□□□□ -0.87
CHD4-203ENST00000535717 TMEM11P17152 192 aa9.64□□□□□ -0.87
CHD4-203ENST00000535717 ETV6P41212 452 aa9.64□□□□□ -0.87
CHD4-203ENST00000535717 LINC00205P59089 165 aa9.64□□□□□ -0.87
CHD4-203ENST00000535717 ACTBP60709 375 aa9.64□□□□□ -0.87
CHD4-203ENST00000535717 CD300CQ08708 224 aa9.64□□□□□ -0.87
CHD4-203ENST00000535717 DYRK1AQ13627 763 aa9.64□□□□□ -0.87
CHD4-203ENST00000535717 HES1Q14469 280 aa9.64□□□□□ -0.87
CHD4-203ENST00000535717 HNF4GQ14541 408 aa9.64□□□□□ -0.87
CHD4-203ENST00000535717 ZNF660Q6AZW8 331 aaPredicted RBP9.64□□□□□ -0.87
CHD4-203ENST00000535717 DHRS11Q6UWP2 260 aa9.64□□□□□ -0.87
CHD4-203ENST00000535717 GIMAP1Q8WWP7 306 aa9.64□□□□□ -0.87
CHD4-203ENST00000535717 EAF1Q96JC9 268 aaPredicted RBP9.64□□□□□ -0.87
CHD4-203ENST00000535717 RBM14Q96PK6 669 aaKnown RBP9.64□□□□□ -0.87
CHD4-203ENST00000535717 SLC25A33Q9BSK2 321 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms