RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 FAM90A23PA8MXZ1 464 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 FAM90A15PP0C7V4 464 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 FAM90A13PP0C7W8 464 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 FAM90A14PP0C7W9 464 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 FAM90A24PP0C7X0 464 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 RND2P52198 227 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 ATP1A1-AS1Q5TC04 95 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 ABHD12Q8N2K0 398 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 KCNK17Q96T54 332 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 RTN4RQ9BZR6 473 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 TLNRD1Q9H1K6 362 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 RBKSQ9H477 322 aa15.66■□□□□ 0.1
SFSWAP-203ENST00000535236 COX6A1P12074 109 aa15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 WDR25Q64LD2 544 aaPredicted RBP15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 CENPVQ7Z7K6 275 aaPredicted RBP15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 CBLN2Q8IUK8 224 aa15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 CDC42EP3Q9UKI2 254 aa15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 KCNK7Q9Y2U2 307 aa15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 NMUP48645 174 aa15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 ZCCHC14Q8WYQ9 949 aaKnown RBP15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 BCL2P10415 239 aa15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 C9orf62Q8N4C0 152 aa15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 RBM38Q9H0Z9 239 aaKnown RBP15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 SSTR5P35346 364 aa15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 SLC16A13Q7RTY0 426 aa15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 RFLNBQ8N5W9 214 aa15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 GZMMP51124 257 aa15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 PSG9Q00887 426 aa15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 RUNX1Q01196 453 aa15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 ZNF345Q14585 488 aa15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 HSF4Q9ULV5 492 aa15.65■□□□□ 0.1
SFSWAP-203ENST00000535236 IGKV3D-11A0A0A0MRZ8 115 aa15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 PGPA6NDG6 321 aa15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 S1PR2O95136 353 aa15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 IGKV3-11P04433 115 aa15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 RCC1P18754 421 aaPredicted RBP15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 TMEM222Q9H0R3 208 aa15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 IGHV1-69-2A0A0G2JMI3 117 aa15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 SMAD7O15105 426 aaKnown RBP15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 COMPP49747 757 aaPredicted RBP15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 KLF14Q8TD94 323 aaPredicted RBP15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 DSPPQ9NZW4 1301 aa15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 SYNGR3O43761 229 aa15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 CD74P04233 296 aa15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 PHLDA3Q9Y5J5 127 aa15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 CKS2P33552 79 aa15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 PRSS8Q16651 343 aa15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 FAM209AQ5JX71 171 aa15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 SGMS2Q8NHU3 365 aa15.64■□□□□ 0.09
SFSWAP-203ENST00000535236 ARAP2Q8WZ64 1704 aa15.63■□□□□ 0.09
SFSWAP-203ENST00000535236 OR9G1Q8NH87 305 aa15.63■□□□□ 0.09
SFSWAP-203ENST00000535236 PLA2G10O15496 165 aa15.63■□□□□ 0.09
SFSWAP-203ENST00000535236 THY1P04216 161 aa15.63■□□□□ 0.09
SFSWAP-203ENST00000535236 TCTAP57738 103 aa15.63■□□□□ 0.09
SFSWAP-203ENST00000535236 SMCHD1A6NHR9 2005 aa15.63■□□□□ 0.09
SFSWAP-203ENST00000535236 KBTBD11O94819 623 aa15.63■□□□□ 0.09
SFSWAP-203ENST00000535236 CD99P14209 185 aa15.63■□□□□ 0.09
SFSWAP-203ENST00000535236 DLL3Q9NYJ7 618 aa15.63■□□□□ 0.09
SFSWAP-203ENST00000535236 FOXH1O75593 365 aa15.63■□□□□ 0.09
SFSWAP-203ENST00000535236 OR2A4O95047 310 aa15.63■□□□□ 0.09
SFSWAP-203ENST00000535236 LIPFP07098 398 aa15.63■□□□□ 0.09
SFSWAP-203ENST00000535236 LBHQ53QV2 105 aaPredicted RBP15.63■□□□□ 0.09
SFSWAP-203ENST00000535236 IBA57Q5T440 356 aaKnown RBP15.63■□□□□ 0.09
SFSWAP-203ENST00000535236 OR2A7Q96R45 310 aa15.63■□□□□ 0.09
SFSWAP-203ENST00000535236 A0A1W2PP11 408 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 ERGP11308 486 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 CLEC7AQ9BXN2 247 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 ALX4Q9H161 411 aaPredicted RBP15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 SIRT4Q9Y6E7 314 aaPredicted RBP15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 BCORQ6W2J9 1755 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 TSPOP30536 169 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 RAB9AP51151 201 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 CX3CL1P78423 397 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 SIGIRRQ6IA17 410 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 VN1R17PQ8TDU5 208 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 DNASE2BQ8WZ79 361 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 ELOVL5Q9NYP7 299 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 IGHV3OR16-10A0A075B7F0 116 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 PGLYRP1O75594 196 aaPredicted RBP15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 SNAI3Q3KNW1 292 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 TMEM252Q8N6L7 170 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 TP53RKQ96S44 253 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 ZNF256Q9Y2P7 627 aaPredicted RBP15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 NDUFB4O95168 129 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 TAS2R60P59551 318 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 CXorf66Q5JRM2 361 aaPredicted RBP15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 EEF1AKMT3Q96AZ1 226 aa15.62■□□□□ 0.09
SFSWAP-203ENST00000535236 B9A039 149 aa15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 LIMS1P48059 325 aa15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 A0A087X0M5 115 aa15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 A0A1B0GX30 115 aa15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 DCAF12L2Q5VW00 463 aa15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 DNM1P46Q6ZS02 220 aa15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 SRXN1Q9BYN0 137 aa15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 JPT1Q9UK76 154 aa15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 ANOS1P23352 680 aa15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 PNKDQ8N490 385 aa15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 DIRC3C9JPN6 131 aa15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 RELQ04864 619 aaPredicted RBP15.61■□□□□ 0.09
SFSWAP-203ENST00000535236 UNC119Q13432 240 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms