RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 OR5B21A6NL26 309 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 WNT2P09544 360 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 Q6ZSR3 168 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 OR2AE1Q8NHA4 323 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 PP6455Q8WZ26 134 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 SIGLEC12Q96PQ1 595 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 ULBP2Q9BZM5 246 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 PLA2G3Q9NZ20 509 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 RNF114Q9Y508 228 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 TNRC18O15417 2968 aaPredicted RBP16.3■□□□□ 0.2
SMPD1-210ENST00000534405 GALR2O43603 387 aaPredicted RBP16.29■□□□□ 0.2
SMPD1-210ENST00000534405 SSR4P51571 173 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 VAMP3Q15836 100 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 KLHDC1Q8N7A1 406 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 ZNF430Q9H8G1 570 aaPredicted RBP16.29■□□□□ 0.2
SMPD1-210ENST00000534405 ELOVL5Q9NYP7 299 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 KIAA1549Q9HCM3 1950 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 TNRC6BQ9UPQ9 1833 aaKnown RBP16.29■□□□□ 0.2
SMPD1-210ENST00000534405 C3orf85A0A1B0GTC6 90 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 K7ERU9 68 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 VAMP5O95183 116 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 PAX9P55771 341 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 SERF2P84101 59 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 EIF3IQ13347 325 aaKnown RBP16.29■□□□□ 0.2
SMPD1-210ENST00000534405 FFAR4Q5NUL3 377 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 DYRK2Q92630 601 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 TMEM56Q96MV1 263 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 TMEM222Q9H0R3 208 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 PLEKHJ1Q9NW61 149 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 TMEM56-RWDD3S4R434 201 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 FREM2Q5SZK8 3169 aa16.29■□□□□ 0.2
SMPD1-210ENST00000534405 IGHV2-26A0A0B4J1V2 119 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 A0A0G2JMM0 328 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 A0A1W2PPB8 328 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 A0A1W2PRS3 328 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 KIR3DP1A8MWS1 328 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 MLNRO43193 412 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 ZNF205O95201 554 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 CFIP05156 583 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 CLDN18P56856 261 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 ARF6P62330 175 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 SCGB1C1Q8TD33 95 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 PSMF1Q92530 271 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 BCL2L2Q92843 193 aaPredicted RBP16.28■□□□□ 0.2
SMPD1-210ENST00000534405 SAMD10Q9BYL1 202 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 ZNF586Q9NXT0 402 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 PATE3B3GLJ2 98 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 CHST1O43916 411 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 RPS19BP1Q86WX3 136 aaKnown RBP16.28■□□□□ 0.2
SMPD1-210ENST00000534405 ZDHHC11Q9H8X9 412 aa16.28■□□□□ 0.2
SMPD1-210ENST00000534405 IGLC7A0M8Q6 106 aa16.27■□□□□ 0.2
SMPD1-210ENST00000534405 ANGPTL7O43827 346 aa16.27■□□□□ 0.2
SMPD1-210ENST00000534405 CRISP2P16562 243 aa16.27■□□□□ 0.2
SMPD1-210ENST00000534405 UCP1P25874 307 aa16.27■□□□□ 0.2
SMPD1-210ENST00000534405 PSMB3P49720 205 aa16.27■□□□□ 0.2
SMPD1-210ENST00000534405 PNKDQ8N490 385 aa16.27■□□□□ 0.2
SMPD1-210ENST00000534405 OR5B3Q8NH48 314 aa16.27■□□□□ 0.2
SMPD1-210ENST00000534405 MAFAQ8NHW3 353 aaPredicted RBP16.27■□□□□ 0.2
SMPD1-210ENST00000534405 TRAV34A0A0B4J273 112 aa16.27■□□□□ 0.19
SMPD1-210ENST00000534405 ADAM20O43506 726 aa16.27■□□□□ 0.19
SMPD1-210ENST00000534405 CRYGSP22914 178 aa16.27■□□□□ 0.19
SMPD1-210ENST00000534405 KRTDAPP60985 99 aa16.27■□□□□ 0.19
SMPD1-210ENST00000534405 FAM27BQ5VT28 67 aa16.27■□□□□ 0.19
SMPD1-210ENST00000534405 TCF23Q7RTU1 214 aa16.27■□□□□ 0.19
SMPD1-210ENST00000534405 PINX1Q96BK5 328 aaKnown RBP16.27■□□□□ 0.19
SMPD1-210ENST00000534405 Q96M66 194 aa16.27■□□□□ 0.19
SMPD1-210ENST00000534405 NCKAP5O14513 1909 aa16.27■□□□□ 0.19
SMPD1-210ENST00000534405 IGKV1-27A0A075B6S5 117 aa16.26■□□□□ 0.19
SMPD1-210ENST00000534405 MPPED1O15442 326 aa16.26■□□□□ 0.19
SMPD1-210ENST00000534405 PATE4P0C8F1 98 aa16.26■□□□□ 0.19
SMPD1-210ENST00000534405 RRADP55042 308 aa16.26■□□□□ 0.19
SMPD1-210ENST00000534405 MLF1P58340 268 aa16.26■□□□□ 0.19
SMPD1-210ENST00000534405 B3GALT5-AS1P59052 145 aa16.26■□□□□ 0.19
SMPD1-210ENST00000534405 Q0VG73 95 aa16.26■□□□□ 0.19
SMPD1-210ENST00000534405 TCTEX1D1Q8N7M0 179 aa16.26■□□□□ 0.19
SMPD1-210ENST00000534405 SIGLECL1Q8N7X8 197 aa16.26■□□□□ 0.19
SMPD1-210ENST00000534405 OR2Y1Q8NGV0 311 aa16.26■□□□□ 0.19
SMPD1-210ENST00000534405 LHX4Q969G2 390 aa16.26■□□□□ 0.19
SMPD1-210ENST00000534405 SPRY1O43609 319 aaPredicted RBP16.26■□□□□ 0.19
SMPD1-210ENST00000534405 PSG1P11464 419 aa16.26■□□□□ 0.19
SMPD1-210ENST00000534405 PRR27Q6MZM9 219 aa16.26■□□□□ 0.19
SMPD1-210ENST00000534405 YRDCQ86U90 279 aaKnown RBP16.26■□□□□ 0.19
SMPD1-210ENST00000534405 ZNF695Q8IW36 515 aa16.26■□□□□ 0.19
SMPD1-210ENST00000534405 SELENOHQ8IZQ5 122 aaKnown RBP16.26■□□□□ 0.19
SMPD1-210ENST00000534405 SPTSSAQ969W0 71 aa16.26■□□□□ 0.19
SMPD1-210ENST00000534405 SLC33A1O00400 549 aaPredicted RBP16.25■□□□□ 0.19
SMPD1-210ENST00000534405 NTN3O00634 580 aaPredicted RBP16.25■□□□□ 0.19
SMPD1-210ENST00000534405 GPX1P07203 203 aa16.25■□□□□ 0.19
SMPD1-210ENST00000534405 CTXN2P0C2S0 81 aa16.25■□□□□ 0.19
SMPD1-210ENST00000534405 MYPOPQ86VE0 399 aaPredicted RBP16.25■□□□□ 0.19
SMPD1-210ENST00000534405 CCDC163A0A0D9SF12 145 aa16.25■□□□□ 0.19
SMPD1-210ENST00000534405 SYNGR3O43761 229 aa16.25■□□□□ 0.19
SMPD1-210ENST00000534405 SERPINA7P05543 415 aa16.25■□□□□ 0.19
SMPD1-210ENST00000534405 MRPL49Q13405 166 aaKnown RBP16.25■□□□□ 0.19
SMPD1-210ENST00000534405 NMSQ5H8A3 153 aa16.25■□□□□ 0.19
SMPD1-210ENST00000534405 CLUHP3Q96NS8 147 aa16.25■□□□□ 0.19
SMPD1-210ENST00000534405 SH2D1BO14796 132 aa16.24■□□□□ 0.19
SMPD1-210ENST00000534405 TNFSF12O43508 249 aa16.24■□□□□ 0.19
SMPD1-210ENST00000534405 OPRM1P35372 400 aa16.24■□□□□ 0.19
SMPD1-210ENST00000534405 BAGE3Q86Y29 109 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms