RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 FGF20Q9NP95 211 aaPredicted RBP3.56□□□□□ -1.84
CASP4-213ENST00000534356 RPRD1BQ9NQG5 326 aaKnown RBP3.56□□□□□ -1.84
CASP4-213ENST00000534356 PSMC3IPQ9P2W1 217 aaPredicted RBP3.56□□□□□ -1.84
CASP4-213ENST00000534356 PYCARDQ9ULZ3 195 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 STK38LQ9Y2H1 464 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 SIGLEC9Q9Y336 463 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 DNAJC15Q9Y5T4 150 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 HYDINQ4G0P3 5121 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 IGHV1-69-2A0A0G2JMI3 117 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 ISPDA4D126 451 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 FTCDNL1E5RQL4 147 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 AZIN1O14977 448 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 IGHV1-46P01743 117 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 HLA-DPB1P04440 258 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 ERCC1P07992 297 aaPredicted RBP3.55□□□□□ -1.84
CASP4-213ENST00000534356 IFI6P09912 130 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 OR8G3PP0DMU2 310 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 ZNF250P15622 560 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 TAC1P20366 129 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 ARR3P36575 388 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 CDKN2CP42773 168 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 KRTAP10-10P60014 251 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 RGNQ15493 299 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 FAM201AQ5SY85 155 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 C1orf140Q5VVS0 124 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 AP1ARQ63HQ0 302 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 ARL9Q6T311 187 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 NTM-AS1Q6ZSK4 140 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 SSX8Q7RTT4 187 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 C10orf107Q8IVU9 208 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 C19orf18Q8NEA5 215 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 OR10J6PQ8NGY7 276 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 SLC35G5Q96KT7 338 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 PPP1R36Q96LQ0 422 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 NAPGQ99747 312 aaPredicted RBP3.55□□□□□ -1.84
CASP4-213ENST00000534356 WFDC6Q9BQY6 131 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 IQCGQ9H095 443 aaKnown RBP3.55□□□□□ -1.84
CASP4-213ENST00000534356 RRAGDQ9NQL2 400 aaPredicted RBP3.55□□□□□ -1.84
CASP4-213ENST00000534356 ZNRD1Q9P1U0 126 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 ST3GAL6Q9Y274 331 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 INSIG2Q9Y5U4 225 aa3.55□□□□□ -1.84
CASP4-213ENST00000534356 IGKV1D-42A0A075B6H8 117 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 CLPSL1A2RUU4 121 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 ERICH4A6NGS2 130 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 COLCA2A8K830 154 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 RPL36A-HNRNPH2H7BZ11 118 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 J3QLI3 93 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 WRBO00258 174 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 HMGN4O00479 90 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 PIN1P1O15428 100 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 EIF1BO60739 113 aaKnown RBP3.54□□□□□ -1.84
CASP4-213ENST00000534356 CLPXO76031 633 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 TSPAN13O95857 204 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 SNRPAP09012 282 aaKnown RBP3.54□□□□□ -1.84
CASP4-213ENST00000534356 MYL2P10916 166 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 CXCR1P25024 350 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 NPY1RP25929 384 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 EVX1P49640 407 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 ERFP50548 548 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 MXD1Q05195 221 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 TAF9Q16594 264 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 TRMT5Q32P41 509 aaKnown RBP3.54□□□□□ -1.84
CASP4-213ENST00000534356 XKR7Q5GH72 579 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 THEM4Q5T1C6 240 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 MRPL2Q5T653 305 aaKnown RBP3.54□□□□□ -1.84
CASP4-213ENST00000534356 UGT2A3Q6UWM9 527 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 WDR86Q86TI4 376 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 PDZD9Q8IXQ8 264 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 C20orf196Q8IYI0 205 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 OR52E2Q8NGJ4 325 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 OR4A15Q8NGL6 344 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 ZNF502Q8TBZ5 544 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 TWIST2Q8WVJ9 160 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 C17orf50Q8WW18 174 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 DEDD2Q8WXF8 326 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 IFT81Q8WYA0 676 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 DDIT4LQ96D03 193 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 CCDC126Q96EE4 140 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 TEX37Q96LM6 180 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 LINC00470Q9BZP3 86 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 SLC38A1Q9H2H9 487 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 HMG20AQ9NP66 347 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 MED4Q9NPJ6 270 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 GOLT1BQ9Y3E0 138 aa3.54□□□□□ -1.84
CASP4-213ENST00000534356 IGLV3-9A0A075B6K5 115 aa3.53□□□□□ -1.84
CASP4-213ENST00000534356 TRAV40A0A0B4J280 105 aa3.53□□□□□ -1.84
CASP4-213ENST00000534356 ZNF99A8MXY4 864 aaPredicted RBP3.53□□□□□ -1.84
CASP4-213ENST00000534356 FAM25EA8MYX2 175 aa3.53□□□□□ -1.84
CASP4-213ENST00000534356 CLDN25C9JDP6 229 aa3.53□□□□□ -1.84
CASP4-213ENST00000534356 CLDN34H7C241 214 aa3.53□□□□□ -1.84
CASP4-213ENST00000534356 PLIN3O60664 434 aa3.53□□□□□ -1.84
CASP4-213ENST00000534356 FCN3O75636 299 aa3.53□□□□□ -1.84
CASP4-213ENST00000534356 IGHMP01871 453 aa3.53□□□□□ -1.84
CASP4-213ENST00000534356 SHBGP04278 402 aa3.53□□□□□ -1.84
CASP4-213ENST00000534356 CRYGBP07316 175 aa3.53□□□□□ -1.84
CASP4-213ENST00000534356 TFPTP0C1Z6 253 aa3.53□□□□□ -1.84
CASP4-213ENST00000534356 RPS4Y1P22090 263 aaKnown RBP3.53□□□□□ -1.84
CASP4-213ENST00000534356 CCNOP22674 350 aa3.53□□□□□ -1.84
CASP4-213ENST00000534356 PAX6P26367 422 aa3.53□□□□□ -1.84
CASP4-213ENST00000534356 GRPRP30550 384 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms