RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 SSBP2P81877 361 aaPredicted RBP13.81□□□□□ -0.2
UBXN1-216ENST00000533908 ACSM3Q53FZ2 586 aa13.81□□□□□ -0.2
UBXN1-216ENST00000533908 TTC23Q5W5X9 447 aa13.81□□□□□ -0.2
UBXN1-216ENST00000533908 NANOGP1Q8N7R0 232 aa13.81□□□□□ -0.2
UBXN1-216ENST00000533908 SETD6Q8TBK2 473 aa13.81□□□□□ -0.2
UBXN1-216ENST00000533908 TM2D1Q9BX74 207 aa13.81□□□□□ -0.2
UBXN1-216ENST00000533908 PALMDQ9NP74 551 aa13.81□□□□□ -0.2
UBXN1-216ENST00000533908 RNF150Q9ULK6 438 aa13.81□□□□□ -0.2
UBXN1-216ENST00000533908 A8MZ25 164 aa13.8□□□□□ -0.2
UBXN1-216ENST00000533908 LDLRAD4O15165 306 aa13.8□□□□□ -0.2
UBXN1-216ENST00000533908 CA2P00918 260 aa13.8□□□□□ -0.2
UBXN1-216ENST00000533908 TRGV3P03979 118 aa13.8□□□□□ -0.2
UBXN1-216ENST00000533908 IGKV1-16P04430 117 aa13.8□□□□□ -0.2
UBXN1-216ENST00000533908 GNAO1P09471 354 aa13.8□□□□□ -0.2
UBXN1-216ENST00000533908 UBBP0CG47 229 aa13.8□□□□□ -0.2
UBXN1-216ENST00000533908 CEACAM6P40199 344 aa13.8□□□□□ -0.2
UBXN1-216ENST00000533908 WNT4P56705 351 aa13.8□□□□□ -0.2
UBXN1-216ENST00000533908 PYHIN1Q6K0P9 492 aa13.8□□□□□ -0.2
UBXN1-216ENST00000533908 IL34Q6ZMJ4 242 aa13.8□□□□□ -0.2
UBXN1-216ENST00000533908 ZNF383Q8NA42 475 aa13.8□□□□□ -0.2
UBXN1-216ENST00000533908 RNF5Q99942 180 aa13.8□□□□□ -0.2
UBXN1-216ENST00000533908 CSMD3Q7Z407 3707 aa13.79□□□□□ -0.2
UBXN1-216ENST00000533908 TMEM14DPA8MWL7 114 aa13.79□□□□□ -0.2
UBXN1-216ENST00000533908 ITGB1BP1O14713 200 aa13.79□□□□□ -0.2
UBXN1-216ENST00000533908 SOCS1O15524 211 aa13.79□□□□□ -0.2
UBXN1-216ENST00000533908 RBBP9O75884 186 aa13.79□□□□□ -0.2
UBXN1-216ENST00000533908 SCTP09683 121 aa13.79□□□□□ -0.2
UBXN1-216ENST00000533908 AHSA2Q719I0 299 aa13.79□□□□□ -0.2
UBXN1-216ENST00000533908 DHRSXQ8N5I4 330 aa13.79□□□□□ -0.2
UBXN1-216ENST00000533908 SETD9Q8NE22 299 aa13.79□□□□□ -0.2
UBXN1-216ENST00000533908 OR5T1Q8NG75 326 aa13.79□□□□□ -0.2
UBXN1-216ENST00000533908 TMEM59Q9BXS4 323 aa13.79□□□□□ -0.2
UBXN1-216ENST00000533908 SLA2Q9H6Q3 261 aa13.79□□□□□ -0.2
UBXN1-216ENST00000533908 CHMP1AQ9HD42 196 aaPredicted RBP13.79□□□□□ -0.2
UBXN1-216ENST00000533908 AK3Q9UIJ7 227 aa13.79□□□□□ -0.2
UBXN1-216ENST00000533908 TRBV6-6A0A0A6YYG2 114 aa13.78□□□□□ -0.2
UBXN1-216ENST00000533908 HSPA12AO43301 675 aa13.78□□□□□ -0.2
UBXN1-216ENST00000533908 TFAP2AP05549 437 aa13.78□□□□□ -0.2
UBXN1-216ENST00000533908 MAPK3P27361 379 aaPredicted RBP13.78□□□□□ -0.2
UBXN1-216ENST00000533908 PJVKQ0ZLH3 352 aa13.78□□□□□ -0.2
UBXN1-216ENST00000533908 KLF5Q13887 457 aaPredicted RBP13.78□□□□□ -0.2
UBXN1-216ENST00000533908 FXYD3Q14802 87 aa13.78□□□□□ -0.2
UBXN1-216ENST00000533908 KCNG3Q8TAE7 436 aa13.78□□□□□ -0.2
UBXN1-216ENST00000533908 RSRP1Q9BUV0 290 aa13.78□□□□□ -0.2
UBXN1-216ENST00000533908 ELOVL1Q9BW60 279 aa13.78□□□□□ -0.2
UBXN1-216ENST00000533908 LPAR5Q9H1C0 372 aa13.78□□□□□ -0.2
UBXN1-216ENST00000533908 PLCXD1Q9NUJ7 323 aa13.78□□□□□ -0.2
UBXN1-216ENST00000533908 STUB1Q9UNE7 303 aa13.78□□□□□ -0.2
UBXN1-216ENST00000533908 IGKV1-6A0A0C4DH72 117 aa13.77□□□□□ -0.21
UBXN1-216ENST00000533908 ANKRD34BA5PLL1 514 aa13.77□□□□□ -0.21
UBXN1-216ENST00000533908 FOXI3A8MTJ6 420 aaPredicted RBP13.77□□□□□ -0.21
UBXN1-216ENST00000533908 MYL12BO14950 172 aa13.77□□□□□ -0.21
UBXN1-216ENST00000533908 SLC22A1O15245 554 aa13.77□□□□□ -0.21
UBXN1-216ENST00000533908 CPEP16870 476 aa13.77□□□□□ -0.21
UBXN1-216ENST00000533908 TMEM50BP56557 158 aa13.77□□□□□ -0.21
UBXN1-216ENST00000533908 RPS16P62249 146 aaKnown RBP13.77□□□□□ -0.21
UBXN1-216ENST00000533908 GLT8D1Q68CQ7 371 aa13.77□□□□□ -0.21
UBXN1-216ENST00000533908 ADAMTSL5Q6ZMM2 481 aa13.77□□□□□ -0.21
UBXN1-216ENST00000533908 ANKRD13BQ86YJ7 626 aa13.77□□□□□ -0.21
UBXN1-216ENST00000533908 GRPEL2Q8TAA5 225 aa13.77□□□□□ -0.21
UBXN1-216ENST00000533908 FBLIM1Q8WUP2 373 aa13.77□□□□□ -0.21
UBXN1-216ENST00000533908 PTX4Q96A99 478 aa13.77□□□□□ -0.21
UBXN1-216ENST00000533908 RANGRFQ9HD47 186 aaPredicted RBP13.77□□□□□ -0.21
UBXN1-216ENST00000533908 PLEKHJ1Q9NW61 149 aa13.77□□□□□ -0.21
UBXN1-216ENST00000533908 FKBP14Q9NWM8 211 aa13.77□□□□□ -0.21
UBXN1-216ENST00000533908 STARD9Q9P2P6 4700 aa13.77□□□□□ -0.21
UBXN1-216ENST00000533908 ADAM30Q9UKF2 790 aa13.77□□□□□ -0.21
UBXN1-216ENST00000533908 SLC25A17O43808 307 aa13.76□□□□□ -0.21
UBXN1-216ENST00000533908 IGLV2-23P01705 113 aa13.76□□□□□ -0.21
UBXN1-216ENST00000533908 SRMP19623 302 aa13.76□□□□□ -0.21
UBXN1-216ENST00000533908 ZBTB25P24278 435 aa13.76□□□□□ -0.21
UBXN1-216ENST00000533908 DEFA5Q01523 94 aa13.76□□□□□ -0.21
UBXN1-216ENST00000533908 HAGHQ16775 308 aa13.76□□□□□ -0.21
UBXN1-216ENST00000533908 RBM48Q5RL73 367 aaKnown RBP13.76□□□□□ -0.21
UBXN1-216ENST00000533908 FAM89BQ8N5H3 189 aa13.76□□□□□ -0.21
UBXN1-216ENST00000533908 POC5Q8NA72 575 aa13.76□□□□□ -0.21
UBXN1-216ENST00000533908 BPIFB6Q8NFQ5 453 aa13.76□□□□□ -0.21
UBXN1-216ENST00000533908 PHYHIPQ92561 330 aa13.76□□□□□ -0.21
UBXN1-216ENST00000533908 THRSPQ92748 146 aa13.76□□□□□ -0.21
UBXN1-216ENST00000533908 TSNAXQ99598 290 aaKnown RBP13.76□□□□□ -0.21
UBXN1-216ENST00000533908 GFI1Q99684 422 aa13.76□□□□□ -0.21
UBXN1-216ENST00000533908 THAP7Q9BT49 309 aaPredicted RBP13.76□□□□□ -0.21
UBXN1-216ENST00000533908 TMED9Q9BVK6 235 aa13.76□□□□□ -0.21
UBXN1-216ENST00000533908 Q9N2K0 584 aa13.76□□□□□ -0.21
UBXN1-216ENST00000533908 ZNF355PQ9NSJ1 428 aa13.76□□□□□ -0.21
UBXN1-216ENST00000533908 BIRC6Q9NR09 4857 aa13.75□□□□□ -0.21
UBXN1-216ENST00000533908 RBMXL2O75526 392 aaKnown RBP13.75□□□□□ -0.21
UBXN1-216ENST00000533908 CRYGBP07316 175 aa13.75□□□□□ -0.21
UBXN1-216ENST00000533908 ARSBP15848 533 aa13.75□□□□□ -0.21
UBXN1-216ENST00000533908 CD40LGP29965 261 aa13.75□□□□□ -0.21
UBXN1-216ENST00000533908 VEGFCP49767 419 aa13.75□□□□□ -0.21
UBXN1-216ENST00000533908 HLA-DRB3P79483 266 aa13.75□□□□□ -0.21
UBXN1-216ENST00000533908 MOB1BQ7L9L4 216 aa13.75□□□□□ -0.21
UBXN1-216ENST00000533908 CEACAM19Q7Z692 300 aa13.75□□□□□ -0.21
UBXN1-216ENST00000533908 MS4A15Q8N5U1 240 aa13.75□□□□□ -0.21
UBXN1-216ENST00000533908 ISOC1Q96CN7 298 aa13.75□□□□□ -0.21
UBXN1-216ENST00000533908 RIMS4Q9H426 269 aaPredicted RBP13.75□□□□□ -0.21
UBXN1-216ENST00000533908 TNCP24821 2201 aa13.74□□□□□ -0.21
UBXN1-216ENST00000533908 SPDEFO95238 335 aa13.74□□□□□ -0.21
UBXN1-216ENST00000533908 BPNT1O95861 308 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms