RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 ADGRL4Q9HBW9 690 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 TMED3Q9Y3Q3 217 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 FAM90A7PA6NKC0 464 aa7.53□□□□□ -1.2
CSDE1-215ENST00000533818 F8W735 103 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-215ENST00000533818 GMNNO75496 209 aa7.53□□□□□ -1.2
CSDE1-215ENST00000533818 OR7C1O76099 320 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-215ENST00000533818 FABP3P05413 133 aa7.53□□□□□ -1.2
CSDE1-215ENST00000533818 C15orf32Q32M92 178 aa7.53□□□□□ -1.2
CSDE1-215ENST00000533818 RPL39P5Q59GN2 51 aa7.53□□□□□ -1.2
CSDE1-215ENST00000533818 C6orf183Q5T699 404 aa7.53□□□□□ -1.2
CSDE1-215ENST00000533818 DMRTA1Q5VZB9 504 aa7.53□□□□□ -1.2
CSDE1-215ENST00000533818 OR5AN1Q8NGI8 311 aa7.53□□□□□ -1.2
CSDE1-215ENST00000533818 OR13C9Q8NGT0 318 aa7.53□□□□□ -1.2
CSDE1-215ENST00000533818 OR10K1Q8NGX5 313 aa7.53□□□□□ -1.2
CSDE1-215ENST00000533818 OR10AC1Q8NH08 325 aa7.53□□□□□ -1.2
CSDE1-215ENST00000533818 YTHDF1Q9BYJ9 559 aaKnown RBP7.53□□□□□ -1.2
CSDE1-215ENST00000533818 C15orf61A6NNL5 157 aa7.52□□□□□ -1.21
CSDE1-215ENST00000533818 MPPED1O15442 326 aa7.52□□□□□ -1.21
CSDE1-215ENST00000533818 SNX3O60493 162 aa7.52□□□□□ -1.21
CSDE1-215ENST00000533818 CPEP16870 476 aa7.52□□□□□ -1.21
CSDE1-215ENST00000533818 RCC1P18754 421 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-215ENST00000533818 GINS1Q14691 196 aa7.52□□□□□ -1.21
CSDE1-215ENST00000533818 MAPRE2Q15555 327 aa7.52□□□□□ -1.21
CSDE1-215ENST00000533818 KISS1Q15726 138 aa7.52□□□□□ -1.21
CSDE1-215ENST00000533818 FAM71F2Q6NXP2 309 aa7.52□□□□□ -1.21
CSDE1-215ENST00000533818 CLEC19AQ6UXS0 136 aa7.52□□□□□ -1.21
CSDE1-215ENST00000533818 UNQ9165/PRO28630Q6UXU0 137 aa7.52□□□□□ -1.21
CSDE1-215ENST00000533818 OR2AK2Q8NG84 335 aa7.52□□□□□ -1.21
CSDE1-215ENST00000533818 OR4K15Q8NH41 348 aa7.52□□□□□ -1.21
CSDE1-215ENST00000533818 IFT22Q9H7X7 185 aa7.52□□□□□ -1.21
CSDE1-215ENST00000533818 PGPEP1Q9NXJ5 209 aa7.52□□□□□ -1.21
CSDE1-215ENST00000533818 ST3GAL6Q9Y274 331 aa7.52□□□□□ -1.21
CSDE1-215ENST00000533818 NACAE9PAV3 2078 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 CCDC182A6NF36 153 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 ZNF670-ZNF695F2Z2N8 137 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 RAB29O14966 203 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 ARPC2O15144 300 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 YPEL1O60688 119 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 OR2J3O76001 311 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 IGHV3-23P01764 117 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 IGKV1-16P04430 117 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 HMGN1P05114 100 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 KRT8P05787 483 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 UBCP0CG48 685 aaKnown RBP7.51□□□□□ -1.21
CSDE1-215ENST00000533818 MYOD1P15172 320 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 BTF3P20290 206 aaKnown RBP7.51□□□□□ -1.21
CSDE1-215ENST00000533818 CRISP1P54107 249 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 CMC4P56277 68 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-215ENST00000533818 VSNL1P62760 191 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 PPP1R8Q12972 351 aaKnown RBP7.51□□□□□ -1.21
CSDE1-215ENST00000533818 RSU1Q15404 277 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 SLC35F2Q8IXU6 374 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 PRSS35Q8N3Z0 413 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 PXT1Q8NFP0 134 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 YPEL2Q96QA6 119 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 ATG101Q9BSB4 218 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 TAF9BQ9HBM6 251 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 PIPOXQ9P0Z9 390 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 JPT1Q9UK76 154 aa7.51□□□□□ -1.21
CSDE1-215ENST00000533818 A0A1B0GW64 132 aa7.5□□□□□ -1.21
CSDE1-215ENST00000533818 MRPS14O60783 128 aaKnown RBP7.5□□□□□ -1.21
CSDE1-215ENST00000533818 PRB4P10163 310 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-215ENST00000533818 GALP22466 123 aa7.5□□□□□ -1.21
CSDE1-215ENST00000533818 FUSP35637 526 aaKnown RBP eCLIP7.5□□□□□ -1.21
CSDE1-215ENST00000533818 HTD2P86397 168 aa7.5□□□□□ -1.21
CSDE1-215ENST00000533818 ICAM4Q14773 271 aa7.5□□□□□ -1.21
CSDE1-215ENST00000533818 ZNF691Q5VV52 312 aa7.5□□□□□ -1.21
CSDE1-215ENST00000533818 LIPKQ5VXJ0 399 aa7.5□□□□□ -1.21
CSDE1-215ENST00000533818 TRAT1Q6PIZ9 186 aa7.5□□□□□ -1.21
CSDE1-215ENST00000533818 C15orf53Q8NAA6 179 aa7.5□□□□□ -1.21
CSDE1-215ENST00000533818 IFI27L2Q9H2X8 130 aa7.5□□□□□ -1.21
CSDE1-215ENST00000533818 UFC1Q9Y3C8 167 aa7.5□□□□□ -1.21
CSDE1-215ENST00000533818 X6R8D5 127 aa7.5□□□□□ -1.21
CSDE1-215ENST00000533818 ZNF705EA8MWA4 302 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-215ENST00000533818 GEMIN2O14893 280 aaKnown RBP7.49□□□□□ -1.21
CSDE1-215ENST00000533818 ST8SIA5O15466 376 aa7.49□□□□□ -1.21
CSDE1-215ENST00000533818 ELLP55199 621 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-215ENST00000533818 MAGOHP61326 146 aaKnown RBP7.49□□□□□ -1.21
CSDE1-215ENST00000533818 LY6G6FQ5SQ64 297 aa7.49□□□□□ -1.21
CSDE1-215ENST00000533818 TMEM244Q5VVB8 128 aa7.49□□□□□ -1.21
CSDE1-215ENST00000533818 GLT8D1Q68CQ7 371 aa7.49□□□□□ -1.21
CSDE1-215ENST00000533818 DMKNQ6E0U4 476 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-215ENST00000533818 C8orf82Q6P1X6 216 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-215ENST00000533818 CD300LDQ6UXZ3 194 aa7.49□□□□□ -1.21
CSDE1-215ENST00000533818 DRAXINQ8NBI3 349 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-215ENST00000533818 OR52N1Q8NH53 320 aa7.49□□□□□ -1.21
CSDE1-215ENST00000533818 ZNRF2Q8NHG8 242 aa7.49□□□□□ -1.21
CSDE1-215ENST00000533818 NIPSNAP1Q9BPW8 284 aa7.49□□□□□ -1.21
CSDE1-215ENST00000533818 S4R3C0 116 aa7.49□□□□□ -1.21
CSDE1-215ENST00000533818 A0A0G2JND7 137 aa7.48□□□□□ -1.21
CSDE1-215ENST00000533818 METTL15A6NJ78 407 aa7.48□□□□□ -1.21
CSDE1-215ENST00000533818 NDUFAB1O14561 156 aa7.48□□□□□ -1.21
CSDE1-215ENST00000533818 MAS1P04201 325 aa7.48□□□□□ -1.21
CSDE1-215ENST00000533818 CRYGBP07316 175 aa7.48□□□□□ -1.21
CSDE1-215ENST00000533818 CTSDP07339 412 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-215ENST00000533818 RBM11P57052 281 aaKnown RBP7.48□□□□□ -1.21
CSDE1-215ENST00000533818 DLK1P80370 383 aa7.48□□□□□ -1.21
CSDE1-215ENST00000533818 MORN3Q6PF18 240 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-215ENST00000533818 SSX6Q7RTT6 188 aa7.48□□□□□ -1.21
CSDE1-215ENST00000533818 CROCCP2Q86T23 111 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms