RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 HLA-DRB3P79483 266 aa13.15□□□□□ -0.3
RPUSD4-207ENST00000532800 ACTBL2Q562R1 376 aa13.15□□□□□ -0.3
RPUSD4-207ENST00000532800 CASC10Q5T4H9 136 aa13.15□□□□□ -0.3
RPUSD4-207ENST00000532800 MS4A15Q8N5U1 240 aa13.15□□□□□ -0.3
RPUSD4-207ENST00000532800 LFNGQ8NES3 379 aa13.15□□□□□ -0.3
RPUSD4-207ENST00000532800 OR5AN1Q8NGI8 311 aa13.15□□□□□ -0.3
RPUSD4-207ENST00000532800 OR6Q1Q8NGQ2 317 aa13.15□□□□□ -0.3
RPUSD4-207ENST00000532800 C11orf54Q9H0W9 315 aaPredicted RBP13.15□□□□□ -0.3
RPUSD4-207ENST00000532800 LPAR5Q9H1C0 372 aa13.15□□□□□ -0.3
RPUSD4-207ENST00000532800 METTL1Q9UBP6 276 aaKnown RBP13.15□□□□□ -0.3
RPUSD4-207ENST00000532800 TENM2Q9NT68 2774 aa13.15□□□□□ -0.31
RPUSD4-207ENST00000532800 ITGB1BP1O14713 200 aa13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 RBBP9O75884 186 aa13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 CDK1P06493 297 aa13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 SRMP19623 302 aa13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 MC5RP33032 325 aa13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 PITPNAQ00169 270 aa13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 TMEM267Q0VDI3 215 aaPredicted RBP13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 PSG5Q15238 335 aa13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 P2RY14Q15391 338 aa13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 SRSF7Q16629 238 aaKnown RBP eCLIP13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 HSD17B12Q53GQ0 312 aa13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 PYHIN1Q6K0P9 492 aa13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 CEACAM19Q7Z692 300 aa13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 GFI1Q99684 422 aa13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 MND1Q9BWT6 205 aa13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 GHITMQ9H3K2 345 aa13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 RNF150Q9ULK6 438 aa13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 LSM2Q9Y333 95 aaKnown RBP13.14□□□□□ -0.31
RPUSD4-207ENST00000532800 TRBV6-6A0A0A6YYG2 114 aa13.13□□□□□ -0.31
RPUSD4-207ENST00000532800 BPNT1O95861 308 aa13.13□□□□□ -0.31
RPUSD4-207ENST00000532800 IGKV1-16P04430 117 aa13.13□□□□□ -0.31
RPUSD4-207ENST00000532800 HSPB1P04792 205 aaKnown RBP13.13□□□□□ -0.31
RPUSD4-207ENST00000532800 SCTP09683 121 aa13.13□□□□□ -0.31
RPUSD4-207ENST00000532800 UCHL1P09936 223 aa13.13□□□□□ -0.31
RPUSD4-207ENST00000532800 OR8U9P0C7N5 309 aa13.13□□□□□ -0.31
RPUSD4-207ENST00000532800 CD37P11049 281 aa13.13□□□□□ -0.31
RPUSD4-207ENST00000532800 CEACAM6P40199 344 aa13.13□□□□□ -0.31
RPUSD4-207ENST00000532800 AKIRIN2Q53H80 203 aa13.13□□□□□ -0.31
RPUSD4-207ENST00000532800 ZNF383Q8NA42 475 aa13.13□□□□□ -0.31
RPUSD4-207ENST00000532800 OR6M1Q8NGM8 313 aa13.13□□□□□ -0.31
RPUSD4-207ENST00000532800 RHOVQ96L33 236 aa13.13□□□□□ -0.31
RPUSD4-207ENST00000532800 STARD9Q9P2P6 4700 aa13.12□□□□□ -0.31
RPUSD4-207ENST00000532800 FOXI3A8MTJ6 420 aaPredicted RBP13.12□□□□□ -0.31
RPUSD4-207ENST00000532800 HSPA12AO43301 675 aa13.12□□□□□ -0.31
RPUSD4-207ENST00000532800 CPEP16870 476 aa13.12□□□□□ -0.31
RPUSD4-207ENST00000532800 ZBTB25P24278 435 aa13.12□□□□□ -0.31
RPUSD4-207ENST00000532800 SPHARQ15513 63 aa13.12□□□□□ -0.31
RPUSD4-207ENST00000532800 OGFRL1Q5TC84 451 aaPredicted RBP13.12□□□□□ -0.31
RPUSD4-207ENST00000532800 ZNF562Q6V9R5 426 aa13.12□□□□□ -0.31
RPUSD4-207ENST00000532800 GRPEL2Q8TAA5 225 aa13.12□□□□□ -0.31
RPUSD4-207ENST00000532800 EDARADDQ8WWZ3 215 aa13.12□□□□□ -0.31
RPUSD4-207ENST00000532800 TMEM203Q969S6 136 aa13.12□□□□□ -0.31
RPUSD4-207ENST00000532800 FLYWCH2Q96CP2 140 aaKnown RBP13.12□□□□□ -0.31
RPUSD4-207ENST00000532800 Q9N2K0 584 aa13.12□□□□□ -0.31
RPUSD4-207ENST00000532800 IGKV1-6A0A0C4DH72 117 aa13.11□□□□□ -0.31
RPUSD4-207ENST00000532800 PTGES3LE9PB15 166 aa13.11□□□□□ -0.31
RPUSD4-207ENST00000532800 ARPC1BO15143 372 aaKnown RBP13.11□□□□□ -0.31
RPUSD4-207ENST00000532800 TRGV3P03979 118 aa13.11□□□□□ -0.31
RPUSD4-207ENST00000532800 TMEM50BP56557 158 aa13.11□□□□□ -0.31
RPUSD4-207ENST00000532800 SSBP2P81877 361 aaPredicted RBP13.11□□□□□ -0.31
RPUSD4-207ENST00000532800 MED22Q15528 200 aa13.11□□□□□ -0.31
RPUSD4-207ENST00000532800 LIPKQ5VXJ0 399 aa13.11□□□□□ -0.31
RPUSD4-207ENST00000532800 RNLSQ5VYX0 342 aa13.11□□□□□ -0.31
RPUSD4-207ENST00000532800 OR4C12Q96R67 309 aa13.11□□□□□ -0.31
RPUSD4-207ENST00000532800 LYSTQ99698 3801 aa13.11□□□□□ -0.31
RPUSD4-207ENST00000532800 RNF5Q99942 180 aa13.11□□□□□ -0.31
RPUSD4-207ENST00000532800 URM1Q9BTM9 101 aaKnown RBP13.11□□□□□ -0.31
RPUSD4-207ENST00000532800 RIMS4Q9H426 269 aaPredicted RBP13.11□□□□□ -0.31
RPUSD4-207ENST00000532800 GAR1Q9NY12 217 aaKnown RBP13.11□□□□□ -0.31
RPUSD4-207ENST00000532800 CASQ2O14958 399 aaPredicted RBP13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 SLC25A17O43808 307 aa13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 SPDEFO95238 335 aa13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 TFAP2AP05549 437 aa13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 ARSBP15848 533 aa13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 RPS16P62249 146 aaKnown RBP13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 FXYD3Q14802 87 aa13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 FAM89BQ8N5H3 189 aa13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 PTX4Q96A99 478 aa13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 ARHGAP5-AS1Q96IT6 56 aa13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 TSNAXQ99598 290 aaKnown RBP13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 RSRP1Q9BUV0 290 aa13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 SLA2Q9H6Q3 261 aa13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 ZMAT4Q9H898 229 aa13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 PLGRKTQ9HBL7 147 aa13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 C12orf4Q9NQ89 552 aa13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 ZNF221Q9UK13 617 aa13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 AK6Q9Y3D8 172 aaKnown RBP13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 CSMD3Q7Z407 3707 aa13.1□□□□□ -0.31
RPUSD4-207ENST00000532800 SLC17A2O00624 439 aa13.09□□□□□ -0.31
RPUSD4-207ENST00000532800 IGHV4-30-4P0DP06 118 aa13.09□□□□□ -0.31
RPUSD4-207ENST00000532800 CD40LGP29965 261 aa13.09□□□□□ -0.31
RPUSD4-207ENST00000532800 VEGFCP49767 419 aa13.09□□□□□ -0.31
RPUSD4-207ENST00000532800 CLDN12P56749 244 aa13.09□□□□□ -0.31
RPUSD4-207ENST00000532800 RPS25P62851 125 aaKnown RBP13.09□□□□□ -0.31
RPUSD4-207ENST00000532800 DEFA5Q01523 94 aa13.09□□□□□ -0.31
RPUSD4-207ENST00000532800 TMEM91Q6ZNR0 172 aa13.09□□□□□ -0.31
RPUSD4-207ENST00000532800 PDPNQ86YL7 162 aa13.09□□□□□ -0.31
RPUSD4-207ENST00000532800 Q8N1Y9 231 aa13.09□□□□□ -0.31
RPUSD4-207ENST00000532800 POC5Q8NA72 575 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms