RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 TRAV8-7A0A075B6U6 113 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 RBFOX2O43251 390 aaKnown RBP eCLIP7.56□□□□□ -1.24e-7■■■■□ 19.5
CTNND1-232ENST00000532649 TSPAN13O95857 204 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 ADRA2AP08913 450 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 SPTBP11277 2137 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 PPP1R1AQ13522 171 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 DNLZQ5SXM8 178 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 LHFPL5Q8TAF8 219 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 MTCL1Q9Y4B5 1905 aaKnown RBP7.56□□□□□ -1.2
CTNND1-232ENST00000532649 C11orf94C9JXX5 98 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 CDK2AP2O75956 126 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 LIMS1P48059 325 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 IL24Q13007 206 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 MRPL30Q8TCC3 161 aaKnown RBP7.56□□□□□ -1.2
CTNND1-232ENST00000532649 MEGF10Q96KG7 1140 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 WFDC6Q9BQY6 131 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 CKAP5Q14008 2032 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 ZNF253O75346 499 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 FAM157CP0CG43 387 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 MGAT2Q10469 447 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 PRSS54Q6PEW0 395 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 MTURNQ8N3F0 131 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 SRXN1Q9BYN0 137 aa7.56□□□□□ -1.2
CTNND1-232ENST00000532649 GEMIN7Q9H840 131 aaKnown RBP7.56□□□□□ -1.2
CTNND1-232ENST00000532649 ZNF646O15015 1829 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-232ENST00000532649 PDE6DO43924 150 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 CA2P00918 260 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 GAPDHP04406 335 aaKnown RBP7.55□□□□□ -1.2
CTNND1-232ENST00000532649 INHBBP09529 407 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 OR5AC1P0C628 307 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 DLX6P56179 175 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 SNRPEP62304 92 aaKnown RBP7.55□□□□□ -1.2
CTNND1-232ENST00000532649 ZNF714Q96N38 554 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 SCNM1Q9BWG6 230 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 CXorf1O96002 111 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 PLAUP00749 431 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 TNFSF10P50591 281 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 NUTF2P61970 127 aaKnown RBP7.55□□□□□ -1.2
CTNND1-232ENST00000532649 LY6EQ16553 131 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 MPV17LQ2QL34 196 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 SSC4DQ8WTU2 575 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 PHLDA3Q9Y5J5 127 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 A0A087X0M5 115 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 A0A1B0GX30 115 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 CGB1A6NKQ9 187 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 SNRPD3P62318 126 aaKnown RBP7.55□□□□□ -1.2
CTNND1-232ENST00000532649 AESQ08117 197 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 DHRS2Q13268 280 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 GABRA6Q16445 453 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 UNQ5815/PRO19632Q6UWF5 114 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 C1orf174Q8IYL3 243 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 SIGLEC12Q96PQ1 595 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 CISD1Q9NZ45 108 aaKnown RBP7.55□□□□□ -1.2
CTNND1-232ENST00000532649 TRAV39A0A0B4J263 110 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 GCM2O75603 506 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-232ENST00000532649 EFEMP2O95967 443 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 ZP3P21754 424 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 ATP5J2P56134 94 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 RPS4XP62701 263 aaKnown RBP7.55□□□□□ -1.2
CTNND1-232ENST00000532649 PSG9Q00887 426 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 ZNF56Q15929 161 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 LINC00596Q86U02 117 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 SSMEM1Q8WWF3 244 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 ZNF488Q96MN9 340 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 KCNK17Q96T54 332 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 LOC107984156A0A0G2JMH3 177 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 CSRP3P50461 194 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 MRPL54Q6P161 138 aaKnown RBP7.55□□□□□ -1.2
CTNND1-232ENST00000532649 CFAP161Q6P656 301 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 ARL17AQ8IVW1 177 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 RFLNBQ8N5W9 214 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 APCDD1LQ8NCL9 501 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 OR1K1Q8NGR3 316 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 GALNT14Q96FL9 552 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 ABHD1Q96SE0 405 aa7.55□□□□□ -1.2
CTNND1-232ENST00000532649 C9orf170A2RU37 121 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 PCSK4Q6UW60 755 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 ABHD14BQ96IU4 210 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 PAXXQ9BUH6 204 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 SOX21Q9Y651 276 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-232ENST00000532649 GREB1Q4ZG55 1949 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 CHD5Q8TDI0 1954 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 hCG_38984A0A1B0GV85 526 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 C17orf51A8MQB3 221 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 SYNGR1O43759 233 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 HYPMO75409 117 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 TEX30Q5JUR7 227 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 SLC25A47Q6Q0C1 308 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 OR2C3Q8N628 320 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 ZNF383Q8NA42 475 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 SLC35B3Q9H1N7 401 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 METTL1Q9UBP6 276 aaKnown RBP7.54□□□□□ -1.2
CTNND1-232ENST00000532649 CDC42EP3Q9UKI2 254 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 THSD7BQ9C0I4 1608 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 DSPPQ9NZW4 1301 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 ANKRD20A5PA0PJZ0 165 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 IFNL4K9M1U5 179 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 COL10A1Q03692 680 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 OR2V2Q96R30 315 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 VGLL1Q99990 258 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms