RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 PROP1O75360 226 aa12.61□□□□□ -0.39
SRPRA-206ENST00000532259 PITX3O75364 302 aa12.61□□□□□ -0.39
SRPRA-206ENST00000532259 CLDN14O95500 239 aa12.61□□□□□ -0.39
SRPRA-206ENST00000532259 CA7P43166 264 aa12.61□□□□□ -0.39
SRPRA-206ENST00000532259 CASP6P55212 293 aa12.61□□□□□ -0.39
SRPRA-206ENST00000532259 EIF5AL1Q6IS14 154 aaKnown RBP12.61□□□□□ -0.39
SRPRA-206ENST00000532259 MARVELD3Q96A59 401 aa12.61□□□□□ -0.39
SRPRA-206ENST00000532259 GAFA1Q96PS6 74 aa12.61□□□□□ -0.39
SRPRA-206ENST00000532259 SAP30LQ9HAJ7 183 aa12.61□□□□□ -0.39
SRPRA-206ENST00000532259 CALYQ9NYX4 217 aa12.61□□□□□ -0.39
SRPRA-206ENST00000532259 KIAA1324LA8MWY0 1029 aaPredicted RBP12.6□□□□□ -0.39
SRPRA-206ENST00000532259 TXNL1O43396 289 aa12.6□□□□□ -0.39
SRPRA-206ENST00000532259 NDUFB7P17568 137 aa12.6□□□□□ -0.39
SRPRA-206ENST00000532259 GZMHP20718 246 aa12.6□□□□□ -0.39
SRPRA-206ENST00000532259 GPR12P47775 334 aa12.6□□□□□ -0.39
SRPRA-206ENST00000532259 RPS16P62249 146 aaKnown RBP12.6□□□□□ -0.39
SRPRA-206ENST00000532259 RUNX1Q01196 453 aa12.6□□□□□ -0.39
SRPRA-206ENST00000532259 ZNF616Q08AN1 781 aa12.6□□□□□ -0.39
SRPRA-206ENST00000532259 MORN2Q502X0 79 aa12.6□□□□□ -0.39
SRPRA-206ENST00000532259 STUMQ69YW2 141 aa12.6□□□□□ -0.39
SRPRA-206ENST00000532259 TMEM182Q6ZP80 229 aaPredicted RBP12.6□□□□□ -0.39
SRPRA-206ENST00000532259 KCNJ16Q9NPI9 418 aa12.6□□□□□ -0.39
SRPRA-206ENST00000532259 RALYQ9UKM9 306 aaKnown RBP12.6□□□□□ -0.39
SRPRA-206ENST00000532259 RBMXL2O75526 392 aaKnown RBP12.6□□□□□ -0.39
SRPRA-206ENST00000532259 DEFA5Q01523 94 aa12.6□□□□□ -0.39
SRPRA-206ENST00000532259 EIF4EBP1Q13541 118 aaPredicted RBP12.6□□□□□ -0.39
SRPRA-206ENST00000532259 HNF4GQ14541 408 aa12.6□□□□□ -0.39
SRPRA-206ENST00000532259 NCR3LG1Q68D85 454 aa12.6□□□□□ -0.39
SRPRA-206ENST00000532259 SSX9Q7RTT3 188 aa12.6□□□□□ -0.39
SRPRA-206ENST00000532259 FAM222BQ8WU58 562 aa12.6□□□□□ -0.39
SRPRA-206ENST00000532259 ZNRD1Q9P1U0 126 aa12.6□□□□□ -0.39
SRPRA-206ENST00000532259 SPTAN1Q13813 2472 aaKnown RBP12.6□□□□□ -0.39
SRPRA-206ENST00000532259 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.59□□□□□ -0.39
SRPRA-206ENST00000532259 RNF212BA8MTL3 300 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 KRBOX1C9JBD0 128 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 PRH1P02810 166 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 METTL15P1P0C7V9 234 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 GNG10P50151 68 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 SULT1A2P50226 295 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 SWI5Q1ZZU3 235 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 ATRAIDQ6UW56 229 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 C1orf229Q6ZS94 237 aaPredicted RBP12.59□□□□□ -0.39
SRPRA-206ENST00000532259 TCF23Q7RTU1 214 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 DYNLRB1Q9NP97 96 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 HCFC1P51610 2035 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 TANC2Q9HCD6 1990 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 NUPL2O15504 423 aaKnown RBP12.59□□□□□ -0.39
SRPRA-206ENST00000532259 SIAH2O43255 324 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 FCN3O75636 299 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 MMP23AO75900 390 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 LOXL3P58215 753 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 CATR1Q13166 79 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 VKORC1L1Q8N0U8 176 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 ZNF561Q8N587 486 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 EIF4E3Q8N5X7 224 aaKnown RBP12.59□□□□□ -0.39
SRPRA-206ENST00000532259 C14orf79Q96F83 325 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 TREM1Q9NP99 234 aa12.59□□□□□ -0.39
SRPRA-206ENST00000532259 M0R1X1 148 aa12.58□□□□□ -0.4
SRPRA-206ENST00000532259 SYNGR2O43760 224 aa12.58□□□□□ -0.4
SRPRA-206ENST00000532259 FCGR3BO75015 233 aa12.58□□□□□ -0.4
SRPRA-206ENST00000532259 ADH4P08319 380 aa12.58□□□□□ -0.4
SRPRA-206ENST00000532259 HTD2P86397 168 aa12.58□□□□□ -0.4
SRPRA-206ENST00000532259 ADORA2A-AS1P86434 159 aa12.58□□□□□ -0.4
SRPRA-206ENST00000532259 BTN1A1Q13410 526 aa12.58□□□□□ -0.4
SRPRA-206ENST00000532259 C17orf58Q2M2W7 97 aa12.58□□□□□ -0.4
SRPRA-206ENST00000532259 SPANXN5Q5MJ07 72 aa12.58□□□□□ -0.4
SRPRA-206ENST00000532259 LSM10Q969L4 123 aaKnown RBP12.58□□□□□ -0.4
SRPRA-206ENST00000532259 SMIM8Q96KF7 97 aa12.58□□□□□ -0.4
SRPRA-206ENST00000532259 ABHD14AQ9BUJ0 271 aa12.58□□□□□ -0.4
SRPRA-206ENST00000532259 SLC25A31Q9H0C2 315 aa12.58□□□□□ -0.4
SRPRA-206ENST00000532259 SVEP1Q4LDE5 3571 aa12.58□□□□□ -0.4
SRPRA-206ENST00000532259 AKAP6Q13023 2319 aa12.58□□□□□ -0.4
SRPRA-206ENST00000532259 TNFRSF1AP19438 455 aa12.57□□□□□ -0.4
SRPRA-206ENST00000532259 TAGLNQ01995 201 aaKnown RBP12.57□□□□□ -0.4
SRPRA-206ENST00000532259 PAX5Q02548 391 aa12.57□□□□□ -0.4
SRPRA-206ENST00000532259 NCMAPQ5T1S8 102 aa12.57□□□□□ -0.4
SRPRA-206ENST00000532259 ZNF665Q9H7R5 613 aa12.57□□□□□ -0.4
SRPRA-206ENST00000532259 PSENENQ9NZ42 101 aa12.57□□□□□ -0.4
SRPRA-206ENST00000532259 F12P00748 615 aaPredicted RBP12.57□□□□□ -0.4
SRPRA-206ENST00000532259 SPP1P10451 314 aa12.57□□□□□ -0.4
SRPRA-206ENST00000532259 ATP6V0CP27449 155 aa12.57□□□□□ -0.4
SRPRA-206ENST00000532259 SDSLQ96GA7 329 aa12.57□□□□□ -0.4
SRPRA-206ENST00000532259 GINS3Q9BRX5 216 aa12.57□□□□□ -0.4
SRPRA-206ENST00000532259 TOLLIPQ9H0E2 274 aa12.57□□□□□ -0.4
SRPRA-206ENST00000532259 OR6C3Q9NZP0 311 aa12.57□□□□□ -0.4
SRPRA-206ENST00000532259 CFAP46Q8IYW2 2715 aa12.57□□□□□ -0.4
SRPRA-206ENST00000532259 TRGV10A0A0A0MS01 117 aa12.56□□□□□ -0.4
SRPRA-206ENST00000532259 CAMLGP49069 296 aa12.56□□□□□ -0.4
SRPRA-206ENST00000532259 RPL23AP62750 156 aaKnown RBP12.56□□□□□ -0.4
SRPRA-206ENST00000532259 PRAMEF5Q5TYX0 476 aa12.56□□□□□ -0.4
SRPRA-206ENST00000532259 TRAT1Q6PIZ9 186 aa12.56□□□□□ -0.4
SRPRA-206ENST00000532259 ZNF788Q6ZQV5 615 aa12.56□□□□□ -0.4
SRPRA-206ENST00000532259 ST6GALNAC3Q8NDV1 305 aa12.56□□□□□ -0.4
SRPRA-206ENST00000532259 Q8TCH9 128 aa12.56□□□□□ -0.4
SRPRA-206ENST00000532259 RNASE6Q93091 150 aaKnown RBP12.56□□□□□ -0.4
SRPRA-206ENST00000532259 ZDHHC16Q969W1 377 aa12.56□□□□□ -0.4
SRPRA-206ENST00000532259 MMP26Q9NRE1 261 aa12.56□□□□□ -0.4
SRPRA-206ENST00000532259 FAM212BQ9NTI7 297 aaPredicted RBP12.56□□□□□ -0.4
SRPRA-206ENST00000532259 CLN8Q9UBY8 286 aa12.56□□□□□ -0.4
SRPRA-206ENST00000532259 MMP24Q9Y5R2 645 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms