RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 USMG5Q96IX5 58 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 TEX12Q9BXU0 123 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 FAM192AQ9GZU8 254 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 IFI27L2Q9H2X8 130 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 MAGIXQ9H6Y5 334 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 JPT1Q9UK76 154 aa6.05□□□□□ -1.44
CD44-232ENST00000531118 A0A1W2PQL4 384 aaPredicted RBP6.04□□□□□ -1.44
CD44-232ENST00000531118 H0YJW9 148 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 M0R2N4 97 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 SULT1C4O75897 302 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 SCAF4O95104 1147 aaKnown RBP6.04□□□□□ -1.44
CD44-232ENST00000531118 FADS2O95864 444 aaKnown RBP6.04□□□□□ -1.44
CD44-232ENST00000531118 MT-ND4P03905 459 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 MFAP2P55001 183 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 PSG5Q15238 335 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 RSU1Q15404 277 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 MORN2Q502X0 79 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 FAM98BQ52LJ0 330 aaKnown RBP6.04□□□□□ -1.44
CD44-232ENST00000531118 TP53I3Q53FA7 332 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 SYT6Q5T7P8 510 aaPredicted RBP6.04□□□□□ -1.44
CD44-232ENST00000531118 ZNF57Q68EA5 555 aaPredicted RBP6.04□□□□□ -1.44
CD44-232ENST00000531118 TRAT1Q6PIZ9 186 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 LINC00596Q86U02 117 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 STPG3Q8N7X2 389 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 OR52L2PQ8NGH6 319 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 OR2G2Q8NGZ5 317 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 OR4K15Q8NH41 348 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 KCNG3Q8TAE7 436 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 ASB9Q96DX5 294 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 SCRT2Q9NQ03 307 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 OR2S2Q9NQN1 319 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 COA4Q9NYJ1 87 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 MLXQ9UH92 298 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 ENOPH1Q9UHY7 261 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 ZNF230Q9UIE0 474 aaPredicted RBP6.04□□□□□ -1.44
CD44-232ENST00000531118 GNG8Q9UK08 70 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 TRAPPC2LQ9UL33 140 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 ST3GAL6Q9Y274 331 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 WASHC3Q9Y3C0 194 aa6.04□□□□□ -1.44
CD44-232ENST00000531118 FLG2Q5D862 2391 aaPredicted RBP6.04□□□□□ -1.44
CD44-232ENST00000531118 IGHV4-4A0A075B6R2 117 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 C11orf94C9JXX5 98 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 H3BNX3 289 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 GEMIN2O14893 280 aaKnown RBP6.03□□□□□ -1.44
CD44-232ENST00000531118 GYG2O15488 501 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 ISG15P05161 165 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 LGALS7P47929 136 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 RASSF2P50749 326 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 NANOS3P60323 173 aaKnown RBP6.03□□□□□ -1.44
CD44-232ENST00000531118 RPS16P62249 146 aaKnown RBP6.03□□□□□ -1.44
CD44-232ENST00000531118 MPV17LQ2QL34 196 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 LGALS9BQ3B8N2 356 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 ANKRD55Q3KP44 614 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 DNAL1Q4LDG9 190 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 RPL39P5Q59GN2 51 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 ATAD3CQ5T2N8 411 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 AADACL4Q5VUY2 407 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 NXNL2Q5VZ03 156 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 BTNL8Q6UX41 500 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 GID4Q8IVV7 300 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 HS3ST5Q8IZT8 346 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 STX19Q8N4C7 294 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 OR10H4Q8NGA5 316 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 OR1L6Q8NGR2 347 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 THRSPQ92748 146 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 CPNE2Q96FN4 548 aaPredicted RBP6.03□□□□□ -1.44
CD44-232ENST00000531118 PRRG3Q9BZD7 231 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 UBQLN2Q9UHD9 624 aa6.03□□□□□ -1.44
CD44-232ENST00000531118 NACAE9PAV3 2078 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 AGRNO00468 2067 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.02□□□□□ -1.45
CD44-232ENST00000531118 TMEM213A2RRL7 107 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 A8MWP6 167 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 FAM90A23PA8MXZ1 464 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 PPP5D1E7EU14 171 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 H7C2Y5 167 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 GNGT2O14610 69 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 TUSC2O75896 110 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 OR2T7P0C7T2 308 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 CT45A6P0DMU7 189 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 CT45A5P0DMU8 189 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 CT45A7P0DMV0 189 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 RPL35AP18077 110 aaKnown RBP6.02□□□□□ -1.45
CD44-232ENST00000531118 RCC1P18754 421 aaPredicted RBP6.02□□□□□ -1.45
CD44-232ENST00000531118 EPHA2P29317 976 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 RIPK1Q13546 671 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 ODF3L2Q3SX64 289 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 GAPTQ8N292 157 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 POM121L12Q8N7R1 296 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 OR2AK2Q8NG84 335 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 FAM46BQ96A09 425 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 TMEM68Q96MH6 324 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 GPER1Q99527 375 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 SULT4A1Q9BR01 284 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 THTPAQ9BU02 230 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 ZNF556Q9HAH1 456 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 TAF9BQ9HBM6 251 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 IL36GQ9NZH8 169 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 ING4Q9UNL4 249 aa6.02□□□□□ -1.45
CD44-232ENST00000531118 FAM223BA6NKX1 122 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms