RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 XCR1P46094 333 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 UQCRFS1P47985 274 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 CRISP3P54108 245 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 BRWD1-AS2P59051 145 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 PSG9Q00887 426 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 Q0VG73 95 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 GINS1Q14691 196 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 OR8B8Q15620 311 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 ATP6AP1LQ52LC2 224 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 PAGE3Q5JUK9 113 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 RGMBQ6NW40 437 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 UNQ6126/PRO20091Q6UXV3 157 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 HAPLN4Q86UW8 402 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 APRG1Q8IVJ8 170 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 MUC20Q8N307 709 aaPredicted RBP4.67□□□□□ -1.66
CD44-231ENST00000531110 ZFP41Q8N8Y5 198 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 OR52E2Q8NGJ4 325 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 PPTC7Q8NI37 304 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 TWIST2Q8WVJ9 160 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 MRPL24Q96A35 216 aaKnown RBP4.67□□□□□ -1.66
CD44-231ENST00000531110 DYNLL2Q96FJ2 89 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 PCED1BQ96HM7 432 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 DERL3Q96Q80 235 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 GPER1Q99527 375 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 MRPL45Q9BRJ2 306 aaKnown RBP4.67□□□□□ -1.66
CD44-231ENST00000531110 AGMATQ9BSE5 352 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 RTBDNQ9BSG5 229 aaPredicted RBP4.67□□□□□ -1.66
CD44-231ENST00000531110 SNRNP25Q9BV90 132 aaKnown RBP4.67□□□□□ -1.66
CD44-231ENST00000531110 EBPLQ9BY08 206 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 CHRNA10Q9GZZ6 450 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 GTSF1LQ9H1H1 148 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 POPDC3Q9HBV1 291 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 UBE2TQ9NPD8 197 aaPredicted RBP4.67□□□□□ -1.66
CD44-231ENST00000531110 WSB2Q9NYS7 404 aaPredicted RBP4.67□□□□□ -1.66
CD44-231ENST00000531110 GALPQ9UBC7 116 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 B4GALT7Q9UBV7 327 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 FBXW11Q9UKB1 542 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 WSB1Q9Y6I7 421 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 ALPK3Q96L96 1907 aa4.67□□□□□ -1.66
CD44-231ENST00000531110 CHD3Q12873 2000 aaKnown RBP4.67□□□□□ -1.66
CD44-231ENST00000531110 NRXN2Q9P2S2 1712 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 TMEM250H0YL14 139 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 J3KT08 172 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 VCYO14598 125 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 SPINT2O43291 252 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 RAMP1O60894 148 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 ARL6IP5O75915 188 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 CLDN1O95832 211 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 MOSP00540 346 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 HBE1P02100 147 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 CRYAAP02489 173 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 CATP04040 527 aaKnown RBP4.66□□□□□ -1.66
CD44-231ENST00000531110 ZNF728P0DKX0 622 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 CT45A10P0DMU9 189 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 TIA1P31483 386 aaKnown RBP eCLIP4.66□□□□□ -1.66
CD44-231ENST00000531110 P2RY1P47900 373 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 CXCL12P48061 93 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 P2RX1P51575 399 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 SIRPAP78324 504 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 SLC25A11Q02978 314 aaKnown RBP4.66□□□□□ -1.66
CD44-231ENST00000531110 KIAA0040Q15053 153 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 TGIF1Q15583 401 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 LINC00303Q3SY05 128 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 SPATA45Q537H7 98 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 TECRLQ5HYJ1 363 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 ZNF506Q5JVG8 444 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 PAPPA-AS1Q5QFB9 102 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 CPTPQ5TA50 214 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 AMMECR1LQ6DCA0 310 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 PWWP2BQ6NUJ5 590 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 Q6ZRG5 221 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 ZNF440Q8IYI8 595 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 ZDHHC22Q8N966 263 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.66□□□□□ -1.66
CD44-231ENST00000531110 OR10G2Q8NGC3 310 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 OR51A4Q8NGJ6 313 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 MFSD8Q8NHS3 518 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 OCC1Q8TAD7 63 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 OR51E1Q8TCB6 317 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 BLNKQ8WV28 456 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 PPP1R1CQ8WVI7 109 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 ST8SIA1Q92185 356 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 LHX4Q969G2 390 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 ESAMQ96AP7 390 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 STARD4Q96DR4 205 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 PERPQ96FX8 193 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 NRTNQ99748 197 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 ANAPC13Q9BS18 74 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 GGTLC1Q9BX51 225 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 LPAR5Q9H1C0 372 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 CES1P1Q9UKY3 287 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 SLC7A7Q9UM01 511 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 PTRH2Q9Y3E5 179 aaKnown RBP4.66□□□□□ -1.66
CD44-231ENST00000531110 DNAJC15Q9Y5T4 150 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 TSC2P49815 1807 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 MYO10Q9HD67 2058 aa4.66□□□□□ -1.66
CD44-231ENST00000531110 A0A0G2JLM5 398 aa4.65□□□□□ -1.67
CD44-231ENST00000531110 A0A0G2JNG1 304 aa4.65□□□□□ -1.67
CD44-231ENST00000531110 A0A1W2PP11 408 aa4.65□□□□□ -1.67
CD44-231ENST00000531110 HHLA1C9JL84 531 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms