RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 TSNAXQ99598 290 aaKnown RBP12.18□□□□□ -0.46
CHMP4A-204ENST00000530996 HDHD3Q9BSH5 251 aaPredicted RBP12.18□□□□□ -0.46
CHMP4A-204ENST00000530996 SLA2Q9H6Q3 261 aa12.18□□□□□ -0.46
CHMP4A-204ENST00000530996 LDLRAD4O15165 306 aa12.17□□□□□ -0.46
CHMP4A-204ENST00000530996 CD1AP06126 327 aa12.17□□□□□ -0.46
CHMP4A-204ENST00000530996 EGR2P11161 476 aaPredicted RBP12.17□□□□□ -0.46
CHMP4A-204ENST00000530996 CEACAM6P40199 344 aa12.17□□□□□ -0.46
CHMP4A-204ENST00000530996 RPS16P62249 146 aaKnown RBP12.17□□□□□ -0.46
CHMP4A-204ENST00000530996 ACSM3Q53FZ2 586 aa12.17□□□□□ -0.46
CHMP4A-204ENST00000530996 TPSG1Q9NRR2 321 aa12.17□□□□□ -0.46
CHMP4A-204ENST00000530996 PSORS1C1Q9UIG5 152 aa12.17□□□□□ -0.46
CHMP4A-204ENST00000530996 ZNF221Q9UK13 617 aa12.17□□□□□ -0.46
CHMP4A-204ENST00000530996 NUBP2Q9Y5Y2 271 aa12.17□□□□□ -0.46
CHMP4A-204ENST00000530996 RYR2Q92736 4967 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 ANKRD34BA5PLL1 514 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 SLC25A17O43808 307 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 SPDEFO95238 335 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 CNIH1O95406 144 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 NAPSAO96009 420 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 ARSBP15848 533 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 ZP3P21754 424 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 ZBTB25P24278 435 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 UNC119Q13432 240 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 PSG5Q15238 335 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 HSD17B12Q53GQ0 312 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 AKIRIN2Q53H80 203 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 PACRGLQ8N7B6 248 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 PHYHIPQ92561 330 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 CITED4Q96RK1 184 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 MND1Q9BWT6 205 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 PLGRKTQ9HBL7 147 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 C12orf4Q9NQ89 552 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 C8orf4Q9NR00 106 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 AK3Q9UIJ7 227 aa12.16□□□□□ -0.46
CHMP4A-204ENST00000530996 ARPC1BO15143 372 aaKnown RBP12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 BPNT1O95861 308 aa12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 IGKV1-16P04430 117 aa12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 GNAO1P09471 354 aa12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 FXYD3Q14802 87 aa12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 P2RY14Q15391 338 aa12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 C1orf100Q5SVJ3 147 aa12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 ZNF880Q6PDB4 577 aa12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 ZNF562Q6V9R5 426 aa12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 LRRTM1Q86UE6 522 aa12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 PDPNQ86YL7 162 aa12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 MS4A15Q8N5U1 240 aa12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 POC5Q8NA72 575 aa12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 OR5AN1Q8NGI8 311 aa12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 OR6M1Q8NGM8 313 aa12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 URM1Q9BTM9 101 aaKnown RBP12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 TM2D1Q9BX74 207 aa12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 C11orf54Q9H0W9 315 aaPredicted RBP12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 RIMS4Q9H426 269 aaPredicted RBP12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 MGAT4AQ9UM21 535 aa12.15□□□□□ -0.46
CHMP4A-204ENST00000530996 LCE6AA0A183 80 aa12.14□□□□□ -0.47
CHMP4A-204ENST00000530996 M0R1X1 148 aa12.14□□□□□ -0.47
CHMP4A-204ENST00000530996 SNRPBP14678 240 aaKnown RBP12.14□□□□□ -0.47
CHMP4A-204ENST00000530996 MRPS15P82914 257 aaKnown RBP12.14□□□□□ -0.47
CHMP4A-204ENST00000530996 DEFA5Q01523 94 aa12.14□□□□□ -0.47
CHMP4A-204ENST00000530996 CBX3Q13185 183 aa12.14□□□□□ -0.47
CHMP4A-204ENST00000530996 CEACAM19Q7Z692 300 aa12.14□□□□□ -0.47
CHMP4A-204ENST00000530996 GTSCR1Q86UQ5 136 aa12.14□□□□□ -0.47
CHMP4A-204ENST00000530996 NANOGP1Q8N7R0 232 aa12.14□□□□□ -0.47
CHMP4A-204ENST00000530996 OR5T1Q8NG75 326 aa12.14□□□□□ -0.47
CHMP4A-204ENST00000530996 RHOVQ96L33 236 aa12.14□□□□□ -0.47
CHMP4A-204ENST00000530996 RNF5Q99942 180 aa12.14□□□□□ -0.47
CHMP4A-204ENST00000530996 TM2D3Q9BRN9 247 aa12.14□□□□□ -0.47
CHMP4A-204ENST00000530996 RANGRFQ9HD47 186 aaPredicted RBP12.14□□□□□ -0.47
CHMP4A-204ENST00000530996 A0A0A6YYD4 124 aa12.13□□□□□ -0.47
CHMP4A-204ENST00000530996 A0A0G2JLM5 398 aa12.13□□□□□ -0.47
CHMP4A-204ENST00000530996 TMEM14DPA8MWL7 114 aa12.13□□□□□ -0.47
CHMP4A-204ENST00000530996 EBAG9O00559 213 aa12.13□□□□□ -0.47
CHMP4A-204ENST00000530996 ITGB1BP1O14713 200 aa12.13□□□□□ -0.47
CHMP4A-204ENST00000530996 SOCS1O15524 211 aa12.13□□□□□ -0.47
CHMP4A-204ENST00000530996 IGLV1-51P01701 117 aa12.13□□□□□ -0.47
CHMP4A-204ENST00000530996 RCN1Q15293 331 aa12.13□□□□□ -0.47
CHMP4A-204ENST00000530996 HARBI1Q96MB7 349 aa12.13□□□□□ -0.47
CHMP4A-204ENST00000530996 SPATA25Q9BR10 227 aa12.13□□□□□ -0.47
CHMP4A-204ENST00000530996 AGMATQ9BSE5 352 aa12.13□□□□□ -0.47
CHMP4A-204ENST00000530996 SLC35D1Q9NTN3 355 aa12.13□□□□□ -0.47
CHMP4A-204ENST00000530996 HUWE1Q7Z6Z7 4374 aaKnown RBP12.13□□□□□ -0.47
CHMP4A-204ENST00000530996 TRBV6-6A0A0A6YYG2 114 aa12.12□□□□□ -0.47
CHMP4A-204ENST00000530996 H3BUA1 57 aa12.12□□□□□ -0.47
CHMP4A-204ENST00000530996 SCTP09683 121 aa12.12□□□□□ -0.47
CHMP4A-204ENST00000530996 SRMP19623 302 aa12.12□□□□□ -0.47
CHMP4A-204ENST00000530996 SYNJ2BPP57105 145 aa12.12□□□□□ -0.47
CHMP4A-204ENST00000530996 LINC00205P59089 165 aa12.12□□□□□ -0.47
CHMP4A-204ENST00000530996 MED22Q15528 200 aa12.12□□□□□ -0.47
CHMP4A-204ENST00000530996 ZNF383Q8NA42 475 aa12.12□□□□□ -0.47
CHMP4A-204ENST00000530996 PHB2Q99623 299 aa12.12□□□□□ -0.47
CHMP4A-204ENST00000530996 CMSS1Q9BQ75 279 aaKnown RBP12.12□□□□□ -0.47
CHMP4A-204ENST00000530996 LPAR5Q9H1C0 372 aa12.12□□□□□ -0.47
CHMP4A-204ENST00000530996 OR2D2Q9H210 308 aa12.12□□□□□ -0.47
CHMP4A-204ENST00000530996 TUBA4BQ9H853 241 aa12.12□□□□□ -0.47
CHMP4A-204ENST00000530996 COA4Q9NYJ1 87 aa12.12□□□□□ -0.47
CHMP4A-204ENST00000530996 TENM2Q9NT68 2774 aa12.12□□□□□ -0.47
CHMP4A-204ENST00000530996 H0Y980 276 aa12.11□□□□□ -0.47
CHMP4A-204ENST00000530996 LGALS7P47929 136 aa12.11□□□□□ -0.47
CHMP4A-204ENST00000530996 VEGFCP49767 419 aa12.11□□□□□ -0.47
CHMP4A-204ENST00000530996 RAB11BQ15907 218 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms