RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 SNAPC3Q92966 411 aa9.44□□□□□ -0.9
LTBP3-219ENST00000530990 C5orf30Q96GV9 206 aa9.44□□□□□ -0.9
LTBP3-219ENST00000530990 CMTM3Q96MX0 182 aa9.44□□□□□ -0.9
LTBP3-219ENST00000530990 GHITMQ9H3K2 345 aa9.44□□□□□ -0.9
LTBP3-219ENST00000530990 ZNF221Q9UK13 617 aa9.44□□□□□ -0.9
LTBP3-219ENST00000530990 NCBP2LA6PVI3 153 aaKnown RBP9.43□□□□□ -0.9
LTBP3-219ENST00000530990 FAM25AB3EWG3 89 aa9.43□□□□□ -0.9
LTBP3-219ENST00000530990 FAM25CB3EWG5 89 aa9.43□□□□□ -0.9
LTBP3-219ENST00000530990 FAM25GB3EWG6 89 aa9.43□□□□□ -0.9
LTBP3-219ENST00000530990 H0YJW9 148 aa9.43□□□□□ -0.9
LTBP3-219ENST00000530990 NFYAP23511 347 aaPredicted RBP9.43□□□□□ -0.9
LTBP3-219ENST00000530990 SOX6P35712 828 aa9.43□□□□□ -0.9
LTBP3-219ENST00000530990 CBX5P45973 191 aa9.43□□□□□ -0.9
LTBP3-219ENST00000530990 F2RL1P55085 397 aa9.43□□□□□ -0.9
LTBP3-219ENST00000530990 ARPC4P59998 168 aa9.43□□□□□ -0.9
LTBP3-219ENST00000530990 HIST2H2BDQ6DRA6 164 aa9.43□□□□□ -0.9
LTBP3-219ENST00000530990 WNT10AQ9GZT5 417 aa9.43□□□□□ -0.9
LTBP3-219ENST00000530990 IFT46Q9NQC8 304 aa9.43□□□□□ -0.9
LTBP3-219ENST00000530990 PLSCR3Q9NRY6 295 aa9.43□□□□□ -0.9
LTBP3-219ENST00000530990 CCDC59Q9P031 241 aaKnown RBP9.43□□□□□ -0.9
LTBP3-219ENST00000530990 ANAPC10Q9UM13 185 aa9.43□□□□□ -0.9
LTBP3-219ENST00000530990 RBM7Q9Y580 266 aaKnown RBP9.43□□□□□ -0.9
LTBP3-219ENST00000530990 CEPT1Q9Y6K0 416 aa9.43□□□□□ -0.9
LTBP3-219ENST00000530990 IGKV1D-13A0A0B4J2D9 117 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 OR5H14A6NHG9 310 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 J3QRK9 145 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 M0R1X1 148 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 HLA-DQB1P01920 261 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 CTXN2P0C2S0 81 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 IGKV1-13P0DP09 117 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 CNTFRP26992 372 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 LINC00205P59089 165 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 ACTBP60709 375 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 MMDQ15546 238 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 SNX29P2Q8IUI4 249 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 LAX1Q8IWV1 398 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 FAM71E2Q8N5Q1 922 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 ZNF383Q8NA42 475 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.42□□□□□ -0.9
LTBP3-219ENST00000530990 RITA1Q96K30 269 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 RBM38Q9H0Z9 239 aaKnown RBP9.42□□□□□ -0.9
LTBP3-219ENST00000530990 MIXL1Q9H2W2 232 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 LIN7CQ9NUP9 197 aaKnown RBP9.42□□□□□ -0.9
LTBP3-219ENST00000530990 SDHAF2Q9NX18 166 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 EXTL2Q9UBQ6 330 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 MRPS7Q9Y2R9 242 aaKnown RBP9.42□□□□□ -0.9
LTBP3-219ENST00000530990 OR2W1Q9Y3N9 320 aa9.42□□□□□ -0.9
LTBP3-219ENST00000530990 SMIM31A0A1B0GVY4 71 aa9.41□□□□□ -0.9
LTBP3-219ENST00000530990 CCDC160A6NGH7 325 aa9.41□□□□□ -0.9
LTBP3-219ENST00000530990 PEX14O75381 377 aa9.41□□□□□ -0.9
LTBP3-219ENST00000530990 TUSC2O75896 110 aa9.41□□□□□ -0.9
LTBP3-219ENST00000530990 PRSS3P35030 304 aa9.41□□□□□ -0.9
LTBP3-219ENST00000530990 C11orf44Q8N8P7 122 aa9.41□□□□□ -0.9
LTBP3-219ENST00000530990 OR8H1Q8NGG4 311 aa9.41□□□□□ -0.9
LTBP3-219ENST00000530990 OR5AN1Q8NGI8 311 aa9.41□□□□□ -0.9
LTBP3-219ENST00000530990 WIPF2Q8TF74 440 aaPredicted RBP9.41□□□□□ -0.9
LTBP3-219ENST00000530990 NECAP2Q9NVZ3 263 aa9.41□□□□□ -0.9
LTBP3-219ENST00000530990 WASHC3Q9Y3C0 194 aa9.41□□□□□ -0.9
LTBP3-219ENST00000530990 H7C2Y5 167 aa9.4□□□□□ -0.9
LTBP3-219ENST00000530990 CTDSP2O14595 271 aa9.4□□□□□ -0.9
LTBP3-219ENST00000530990 NBR2O15453 112 aa9.4□□□□□ -0.9
LTBP3-219ENST00000530990 RGS5O15539 181 aa9.4□□□□□ -0.9
LTBP3-219ENST00000530990 OR5H8P0DN80 308 aa9.4□□□□□ -0.9
LTBP3-219ENST00000530990 MC5RP33032 325 aa9.4□□□□□ -0.9
LTBP3-219ENST00000530990 LUMP51884 338 aaPredicted RBP9.4□□□□□ -0.9
LTBP3-219ENST00000530990 CDK10Q15131 360 aa9.4□□□□□ -0.9
LTBP3-219ENST00000530990 RNASE12Q5GAN4 147 aaKnown RBP9.4□□□□□ -0.9
LTBP3-219ENST00000530990 C10orf99Q6UWK7 81 aa9.4□□□□□ -0.9
LTBP3-219ENST00000530990 PDPNQ86YL7 162 aa9.4□□□□□ -0.9
LTBP3-219ENST00000530990 OR5AP2Q8NGF4 316 aa9.4□□□□□ -0.9
LTBP3-219ENST00000530990 GPX8Q8TED1 209 aa9.4□□□□□ -0.9
LTBP3-219ENST00000530990 HSPB9Q9BQS6 159 aa9.4□□□□□ -0.9
LTBP3-219ENST00000530990 ADAM30Q9UKF2 790 aa9.4□□□□□ -0.9
LTBP3-219ENST00000530990 GAB2Q9UQC2 676 aa9.4□□□□□ -0.9
LTBP3-219ENST00000530990 LINC01548A6NM66 108 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 FBXO24O75426 580 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 NDUFA3O95167 84 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 IGLV2-14P01704 120 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 IGHG2P01859 326 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 APOA2P02652 100 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 IGKV1-16P04430 117 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 CD28P10747 220 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 NAT1P18440 290 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 AADACP22760 399 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 FCGR2CP31995 323 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 SLC35E3Q7Z769 313 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 ZNF645Q8N7E2 425 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 SGMS2Q8NHU3 365 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 NOL4LQ96MY1 436 aaPredicted RBP9.39□□□□□ -0.91
LTBP3-219ENST00000530990 RASL11BQ9BPW5 248 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 SLIRPQ9GZT3 109 aaKnown RBP9.39□□□□□ -0.91
LTBP3-219ENST00000530990 C6orf62Q9GZU0 229 aaPredicted RBP9.39□□□□□ -0.91
LTBP3-219ENST00000530990 SCPEP1Q9HB40 452 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 SLC35D1Q9NTN3 355 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 EHFQ9NZC4 300 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 LINC00527Q9UJ94 153 aa9.39□□□□□ -0.91
LTBP3-219ENST00000530990 LINC00473A8K010 186 aa9.38□□□□□ -0.91
LTBP3-219ENST00000530990 RBBP9O75884 186 aa9.38□□□□□ -0.91
LTBP3-219ENST00000530990 PPYP01298 95 aa9.38□□□□□ -0.91
LTBP3-219ENST00000530990 PMP2P02689 132 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms