RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 VAX1Q5SQQ9 334 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 LDLRAD2Q5SZI1 272 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 MINOS1Q5TGZ0 78 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 RNLSQ5VYX0 342 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 TMEM236Q5W0B7 351 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 TMEM42Q69YG0 159 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 ZNF322Q6U7Q0 402 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-213ENST00000530784 TMEM179BQ7Z7N9 219 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 ZNF676Q8N7Q3 588 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 KLHL30-AS1Q8NEE0 82 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 NDNFQ8TB73 568 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 TRMT10AQ8TBZ6 339 aaKnown RBP5.07□□□□□ -1.6
CSDE1-213ENST00000530784 AKR1E2Q96JD6 320 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 ZNF714Q96N38 554 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 PRRG3Q9BZD7 231 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 PKIBQ9C010 78 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 PLEKHA1Q9HB21 404 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 SLC25A19Q9HC21 320 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 COPS3Q9UNS2 423 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 HILPDAQ9Y5L2 63 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 R4GMQ9 66 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 MINOS1-NBL1R4GNA1 71 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 V9GYS6 101 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 DOCK11Q5JSL3 2073 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 IGHV2-26A0A0B4J1V2 119 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 FAM230AA0A1W2PPH8 454 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 CCDC182A6NF36 153 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 A6NIN4 97 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 DHRS7CA6NNS2 312 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 ZNF670-ZNF695F2Z2N8 137 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 CLIC3O95833 236 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 ANXA8P13928 327 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 FHITP49789 147 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 ARHGDIBP52566 201 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 CXCR4P61073 352 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 ACTR3P61158 418 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 GNGT1P63211 74 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 CBX1P83916 185 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 MEF2CQ06413 473 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-213ENST00000530784 ECSCRQ19T08 205 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 MUC21Q5SSG8 566 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 PLEKHG7Q6ZR37 379 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 CCDC121Q6ZUS5 278 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 TCF23Q7RTU1 214 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 ANGPTL5Q86XS5 388 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 ELMOD2Q8IZ81 293 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 HS3ST5Q8IZT8 346 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 WFDC9Q8NEX5 89 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 OR5AU1Q8NGC0 362 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 OR4X2Q8NGF9 303 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 OR1B1Q8NGR6 318 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 CANT1Q8WVQ1 401 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 CAPSLQ8WWF8 208 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 DNAJC9Q8WXX5 260 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 EMG1Q92979 244 aaKnown RBP5.06□□□□□ -1.6
CSDE1-213ENST00000530784 CEP19Q96LK0 163 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 TMEM133Q9H2Q1 129 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 TVP23BQ9NYZ1 205 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 OR52A1Q9UKL2 312 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 SLC7A11Q9UPY5 501 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 TSSC4Q9Y5U2 329 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-213ENST00000530784 SNX5Q9Y5X3 404 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 LINC00312Q9Y6C7 94 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 CMYA5Q8N3K9 4069 aa5.06□□□□□ -1.6
CSDE1-213ENST00000530784 WNK1Q9H4A3 2382 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 A0A1B0GTI1 187 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 TCRBV4S1A1TA0A5B7 111 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 K7EIL1 84 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 MAGEB4O15481 346 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-213ENST00000530784 PRKYO43930 277 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 GATBO75879 557 aaKnown RBP5.05□□□□□ -1.6
CSDE1-213ENST00000530784 RPP14O95059 124 aaKnown RBP5.05□□□□□ -1.6
CSDE1-213ENST00000530784 HAND1O96004 215 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 KRT8P05787 483 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 CCL1P22362 96 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 CALB2P22676 271 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 GABRR1P24046 479 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 HTR1DP28221 377 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 BRS3P32247 399 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 CRISP1P54107 249 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 SPHARQ15513 63 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 GRK1Q15835 563 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 SLX4IPQ5VYV7 408 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 CD164L2Q6UWJ8 174 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 BAIAP2L2Q6UXY1 529 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 SLC25A26Q70HW3 274 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 TRAPPC6BQ86SZ2 158 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 EGFL6Q8IUX8 553 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 LAX1Q8IWV1 398 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 SLC35F2Q8IXU6 374 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 Q8IYB0 196 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 TPRX1Q8N7U7 411 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 OR4P4Q8NGL7 312 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 ZNF596Q8TC21 504 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 GPR148Q8TDV2 347 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 MYDGFQ969H8 173 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 BORCS8Q96FH0 119 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 APOL4Q9BPW4 351 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 KRTAP4-4Q9BYR3 166 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 CHST5Q9GZS9 411 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms