RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 PEX14O75381 377 aa20.06■□□□□ 0.8
LDLRAD3-203ENST00000528989 PGLYRP1O75594 196 aaPredicted RBP20.06■□□□□ 0.8
LDLRAD3-203ENST00000528989 IGHV4-38-2P0DP08 117 aa20.06■□□□□ 0.8
LDLRAD3-203ENST00000528989 NCR3LG1Q68D85 454 aa20.06■□□□□ 0.8
LDLRAD3-203ENST00000528989 SLC25A42Q86VD7 318 aa20.06■□□□□ 0.8
LDLRAD3-203ENST00000528989 RTN4IP1Q8WWV3 396 aaPredicted RBP20.06■□□□□ 0.8
LDLRAD3-203ENST00000528989 PIPOXQ9P0Z9 390 aa20.06■□□□□ 0.8
LDLRAD3-203ENST00000528989 TRAV40A0A0B4J280 105 aa20.05■□□□□ 0.8
LDLRAD3-203ENST00000528989 UBE2E1P51965 193 aa20.05■□□□□ 0.8
LDLRAD3-203ENST00000528989 CMTM1Q8IZ96 169 aa20.05■□□□□ 0.8
LDLRAD3-203ENST00000528989 MINDY2Q8NBR6 621 aa20.05■□□□□ 0.8
LDLRAD3-203ENST00000528989 ST6GALNAC6Q969X2 333 aa20.05■□□□□ 0.8
LDLRAD3-203ENST00000528989 RPL30P62888 115 aaKnown RBP20.05■□□□□ 0.8
LDLRAD3-203ENST00000528989 EIF4EBP1Q13541 118 aaPredicted RBP20.05■□□□□ 0.8
LDLRAD3-203ENST00000528989 TBC1D26Q86UD7 250 aa20.05■□□□□ 0.8
LDLRAD3-203ENST00000528989 PIP4P2Q8N4L2 257 aa20.05■□□□□ 0.8
LDLRAD3-203ENST00000528989 OR52B4Q8NGK2 314 aa20.05■□□□□ 0.8
LDLRAD3-203ENST00000528989 OR51H1Q8NH63 302 aa20.05■□□□□ 0.8
LDLRAD3-203ENST00000528989 SMR3AQ99954 134 aa20.05■□□□□ 0.8
LDLRAD3-203ENST00000528989 A0A1B0GVG6 124 aa20.04■□□□□ 0.8
LDLRAD3-203ENST00000528989 LINC00473A8K010 186 aa20.04■□□□□ 0.8
LDLRAD3-203ENST00000528989 M0R1X1 148 aa20.04■□□□□ 0.8
LDLRAD3-203ENST00000528989 OR4E1P0C645 316 aa20.04■□□□□ 0.8
LDLRAD3-203ENST00000528989 SUPT4H1P63272 117 aaKnown RBP20.04■□□□□ 0.8
LDLRAD3-203ENST00000528989 PPP1R1AQ13522 171 aa20.04■□□□□ 0.8
LDLRAD3-203ENST00000528989 KLF17Q5JT82 389 aaPredicted RBP20.04■□□□□ 0.8
LDLRAD3-203ENST00000528989 RUSC1-AS1Q66K80 236 aa20.04■□□□□ 0.8
LDLRAD3-203ENST00000528989 BRD3OSQ6XYD6 125 aa20.04■□□□□ 0.8
LDLRAD3-203ENST00000528989 ZNF486Q96H40 463 aaPredicted RBP20.04■□□□□ 0.8
LDLRAD3-203ENST00000528989 AKR1E2Q96JD6 320 aa20.04■□□□□ 0.8
LDLRAD3-203ENST00000528989 SEC22CQ9BRL7 303 aa20.04■□□□□ 0.8
LDLRAD3-203ENST00000528989 MPPED1O15442 326 aa20.03■□□□□ 0.8
LDLRAD3-203ENST00000528989 MECP2P51608 486 aaKnown RBP20.03■□□□□ 0.8
LDLRAD3-203ENST00000528989 SP6Q3SY56 376 aa20.03■□□□□ 0.8
LDLRAD3-203ENST00000528989 PRR13Q9NZ81 148 aa20.03■□□□□ 0.8
LDLRAD3-203ENST00000528989 LY6LH3BQJ8 138 aa20.03■□□□□ 0.8
LDLRAD3-203ENST00000528989 TATDN3Q17R31 274 aa20.03■□□□□ 0.8
LDLRAD3-203ENST00000528989 C4orf46Q504U0 113 aa20.03■□□□□ 0.8
LDLRAD3-203ENST00000528989 TMEM128Q5BJH2 165 aa20.03■□□□□ 0.8
LDLRAD3-203ENST00000528989 GLDNQ6ZMI3 551 aaPredicted RBP20.03■□□□□ 0.8
LDLRAD3-203ENST00000528989 ZNF833PQ6ZTB9 187 aa20.03■□□□□ 0.8
LDLRAD3-203ENST00000528989 FAM216AQ8WUB2 273 aa20.03■□□□□ 0.8
LDLRAD3-203ENST00000528989 C18orf12Q96KH6 178 aa20.03■□□□□ 0.8
LDLRAD3-203ENST00000528989 GAB2Q9UQC2 676 aa20.03■□□□□ 0.8
LDLRAD3-203ENST00000528989 HILPDAQ9Y5L2 63 aa20.03■□□□□ 0.8
LDLRAD3-203ENST00000528989 SOX21Q9Y651 276 aaPredicted RBP20.03■□□□□ 0.8
LDLRAD3-203ENST00000528989 TEX13DA0A0J9YY54 714 aaPredicted RBP20.02■□□□□ 0.8
LDLRAD3-203ENST00000528989 J3QLI3 93 aa20.02■□□□□ 0.8
LDLRAD3-203ENST00000528989 SLC22A5O76082 557 aa20.02■□□□□ 0.8
LDLRAD3-203ENST00000528989 HTR1DP28221 377 aa20.02■□□□□ 0.8
LDLRAD3-203ENST00000528989 Q6ZNX1 250 aa20.02■□□□□ 0.8
LDLRAD3-203ENST00000528989 S1PR3Q99500 378 aa20.02■□□□□ 0.8
LDLRAD3-203ENST00000528989 ALX4Q9H161 411 aaPredicted RBP20.02■□□□□ 0.8
LDLRAD3-203ENST00000528989 CRYM-AS1A6NIL9 109 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 VAMP1P23763 118 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 DUTP33316 252 aaKnown RBP20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 ZNF137PP52743 207 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 DHODHQ02127 395 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 DYNAPQ8N1N2 210 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 AJUBAQ96IF1 538 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 TP53RKQ96S44 253 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 GHITMQ9H3K2 345 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 IGHV1-69DA0A0B4J2H0 117 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 IGHV1-69P01742 117 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 CT45A6P0DMU7 189 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 CT45A5P0DMU8 189 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 CT45A7P0DMV0 189 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 SAA4P35542 130 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 RAG2P55895 527 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 LGALS4P56470 323 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 BRWD1-AS2P59051 145 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 RND3P61587 244 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 DHRS2Q13268 280 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 SLC9A3R2Q15599 337 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 OR2B11Q5JQS5 317 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 ZBTB34Q8NCN2 500 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 MRPL20Q9BYC9 149 aaKnown RBP20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 DPM3Q9P2X0 92 aa20.01■□□□□ 0.79
LDLRAD3-203ENST00000528989 NPFFO15130 113 aa20■□□□□ 0.79
LDLRAD3-203ENST00000528989 DHFRP00374 187 aa20■□□□□ 0.79
LDLRAD3-203ENST00000528989 HLA-AP01891 365 aaKnown RBP20■□□□□ 0.79
LDLRAD3-203ENST00000528989 UBE2MP61081 183 aaKnown RBP20■□□□□ 0.79
LDLRAD3-203ENST00000528989 SSX2Q16385 188 aa20■□□□□ 0.79
LDLRAD3-203ENST00000528989 GPR157Q5UAW9 335 aa20■□□□□ 0.79
LDLRAD3-203ENST00000528989 SPNS3Q6ZMD2 512 aa20■□□□□ 0.79
LDLRAD3-203ENST00000528989 ZNF436-AS1Q8NC38 126 aaPredicted RBP20■□□□□ 0.79
LDLRAD3-203ENST00000528989 NAA60Q9H7X0 242 aa20■□□□□ 0.79
LDLRAD3-203ENST00000528989 A0A0A6YYJ9 748 aa19.99■□□□□ 0.79
LDLRAD3-203ENST00000528989 OR5AC1P0C628 307 aa19.99■□□□□ 0.79
LDLRAD3-203ENST00000528989 F2RP25116 425 aa19.99■□□□□ 0.79
LDLRAD3-203ENST00000528989 SGPP2Q8IWX5 399 aa19.99■□□□□ 0.79
LDLRAD3-203ENST00000528989 CCDC71LQ8N9Z2 235 aa19.99■□□□□ 0.79
LDLRAD3-203ENST00000528989 ZNF383Q8NA42 475 aa19.99■□□□□ 0.79
LDLRAD3-203ENST00000528989 CASTOR1Q8WTX7 329 aa19.99■□□□□ 0.79
LDLRAD3-203ENST00000528989 C3orf85A0A1B0GTC6 90 aa19.99■□□□□ 0.79
LDLRAD3-203ENST00000528989 C9orf170A2RU37 121 aa19.99■□□□□ 0.79
LDLRAD3-203ENST00000528989 A8MV72 311 aaPredicted RBP19.99■□□□□ 0.79
LDLRAD3-203ENST00000528989 LEUTXA8MZ59 168 aa19.99■□□□□ 0.79
LDLRAD3-203ENST00000528989 TAS2R31P59538 309 aa19.99■□□□□ 0.79
LDLRAD3-203ENST00000528989 CBX3Q13185 183 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms