RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 GFOD1Q9NXC2 390 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 PSENENQ9NZ42 101 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 PPIAL4AQ9Y536 164 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 PRRC2CQ9Y520 2896 aaKnown RBP12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 CELSR3Q9NYQ7 3312 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 IGHV3-43A0A0B4J1X8 118 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 TMEM178BH3BS89 294 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 ST8SIA5O15466 376 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 TMEM50AO95807 157 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 IFNA5P01569 189 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 IGHV3-43DP0DP04 118 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 DUTP33316 252 aaKnown RBP12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 UBE2KP61086 200 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 RPL30P62888 115 aaKnown RBP12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 CCL8P80075 99 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 C17orf58Q2M2W7 97 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 Q3ZCU0 254 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 ADAM5Q6NVV9 412 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 H2BFWTQ7Z2G1 175 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 OR5C1Q8NGR4 320 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 PLPPR2Q96GM1 343 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 DCTN5Q9BTE1 182 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 DYNLRB1Q9NP97 96 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 IDI2-AS1Q9NZ38 188 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 HSPB7Q9UBY9 170 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 LINC00312Q9Y6C7 94 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 TANC2Q9HCD6 1990 aa12.25□□□□□ -0.45
ECHDC1-220ENST00000528402 SPTBN2O15020 2390 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 DSCAML1Q8TD84 2053 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 RP1L1Q8IWN7 2480 aaPredicted RBP12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 PLCE1Q9P212 2302 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 TMEM218A2RU14 115 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 C17orf98A8MV24 154 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 DEFB108AA8MXU0 73 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 E7EQL1 145 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 FSTL3O95633 263 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 GYPAP02724 150 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 DYNLT3P51808 116 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 DPPA3Q6W0C5 159 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 KDF1Q8NAX2 398 aaPredicted RBP12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 LFNGQ8NES3 379 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 BPIFCQ8NFQ6 507 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 RAB39BQ96DA2 213 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 C5orf30Q96GV9 206 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 CCL13Q99616 98 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 PARD6GQ9BYG4 376 aaPredicted RBP12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 GAL3ST2Q9H3Q3 398 aa12.24□□□□□ -0.45
ECHDC1-220ENST00000528402 KRASP01116 189 aa12.23□□□□□ -0.45
ECHDC1-220ENST00000528402 OR8U8P0C7N1 319 aa12.23□□□□□ -0.45
ECHDC1-220ENST00000528402 TNFRSF9Q07011 255 aa12.23□□□□□ -0.45
ECHDC1-220ENST00000528402 ATP6V1FQ16864 119 aa12.23□□□□□ -0.45
ECHDC1-220ENST00000528402 FAM201AQ5SY85 155 aa12.23□□□□□ -0.45
ECHDC1-220ENST00000528402 CLEC9AQ6UXN8 241 aa12.23□□□□□ -0.45
ECHDC1-220ENST00000528402 Q6ZRG5 221 aa12.23□□□□□ -0.45
ECHDC1-220ENST00000528402 DMRTC2Q8IXT2 367 aaPredicted RBP12.23□□□□□ -0.45
ECHDC1-220ENST00000528402 DEFB108BQ8NET1 73 aa12.23□□□□□ -0.45
ECHDC1-220ENST00000528402 S1PR3Q99500 378 aa12.23□□□□□ -0.45
ECHDC1-220ENST00000528402 ABHD14AQ9BUJ0 271 aa12.23□□□□□ -0.45
ECHDC1-220ENST00000528402 HRH4Q9H3N8 390 aa12.23□□□□□ -0.45
ECHDC1-220ENST00000528402 TMEM106BQ9NUM4 274 aa12.23□□□□□ -0.45
ECHDC1-220ENST00000528402 KAAG1Q9UBP8 84 aa12.23□□□□□ -0.45
ECHDC1-220ENST00000528402 ZFHX4Q86UP3 3567 aa12.23□□□□□ -0.45
ECHDC1-220ENST00000528402 LOC400499M0QZD8 3231 aa12.23□□□□□ -0.45
ECHDC1-220ENST00000528402 MAP1BP46821 2468 aaKnown RBP12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 RAMP3O60896 148 aa12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 S1PR2O95136 353 aa12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 TSPAN15O95858 294 aa12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 OMGP23515 440 aa12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 G6PCP35575 357 aa12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 CAMLGP49069 296 aa12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 THBS3P49746 956 aa12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 BRWD1-AS2P59051 145 aa12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 ZNF816Q0VGE8 651 aaPredicted RBP12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 CLINT1Q14677 625 aa12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 ODF3L1Q8IXM7 274 aa12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 HSD17B11Q8NBQ5 300 aa12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 OR2G3Q8NGZ4 309 aa12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 HIPK2Q9H2X6 1198 aa12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 IFI27L2Q9H2X8 130 aa12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 SLC25A10Q9UBX3 287 aaPredicted RBP12.22□□□□□ -0.45
ECHDC1-220ENST00000528402 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 BTBD17A6NE02 478 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 LINC00473A8K010 186 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 B8ZZF3 427 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 M0R1X1 148 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 TNFRSF13BO14836 293 aaPredicted RBP12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 ZG16O60844 167 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 CST7O76096 145 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 PRH1P02810 166 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 ATP6V0CP27449 155 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 ERVK-16P61578 105 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 RPP30P78346 268 aaKnown RBP12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 LTC4SQ16873 150 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 AARDQ4LEZ3 155 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 LRRC10Q5BKY1 277 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 BTNL3Q6UXE8 466 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 OR52E5Q8NH55 327 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 SCGB1C1Q8TD33 95 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 NARS2Q96I59 477 aaKnown RBP12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 AIFM2Q9BRQ8 373 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms