RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 IZUMO2Q6UXV1 221 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 ZNF367Q7RTV3 350 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 ZNF429Q86V71 674 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 OR56B1Q8NGI3 324 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 MYOZ3Q8TDC0 251 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 PTX4Q96A99 478 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 RITA1Q96K30 269 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 KCTD7Q96MP8 289 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 PECRQ9BY49 303 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 TOLLIPQ9H0E2 274 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 OR51J1Q9H342 316 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 KCNK15Q9H427 330 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 EDA2RQ9HAV5 297 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 C12orf4Q9NQ89 552 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 RAB22AQ9UL26 194 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 IGHV7-81A0A0B4J1V7 117 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 OR5H14A6NHG9 310 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 PDCD5O14737 125 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 ST8SIA5O15466 376 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 DENRO43583 198 aaKnown RBP8.17□□□□□ -1.1
CPSF1-203ENST00000527916 RBBP9O75884 186 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 CT45A6P0DMU7 189 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 CT45A5P0DMU8 189 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 CT45A7P0DMV0 189 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 CEACAM6P40199 344 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 CRIP2P52943 208 aaPredicted RBP8.17□□□□□ -1.1
CPSF1-203ENST00000527916 HLA-DRB3P79483 266 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 SSX1Q16384 188 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 PLAC9Q5JTB6 97 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 ZNF660Q6AZW8 331 aaPredicted RBP8.17□□□□□ -1.1
CPSF1-203ENST00000527916 OR5AN1Q8NGI8 311 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 SETD6Q8TBK2 473 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 C4orf3Q8WVX3 66 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 ARHGAP5-AS1Q96IT6 56 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 UBE2E2Q96LR5 201 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 CNBD2Q96M20 576 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 CMSS1Q9BQ75 279 aaKnown RBP8.17□□□□□ -1.1
CPSF1-203ENST00000527916 TM2D3Q9BRN9 247 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 KIAA1456Q9P272 454 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 GAB2Q9UQC2 676 aa8.17□□□□□ -1.1
CPSF1-203ENST00000527916 TRDV1A0A1B0GX56 115 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 IFITM5A6NNB3 132 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 TRDCB7Z8K6 153 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 H0YJW9 148 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 PROP1O75360 226 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 DIRAS3O95661 229 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 IGLV1-40P01703 118 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 SCTP09683 121 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 OR8U8P0C7N1 319 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 SLC2A2P11168 524 aaPredicted RBP8.16□□□□□ -1.1
CPSF1-203ENST00000527916 RAB6AP20340 208 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 CNTFRP26992 372 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 SERPINB10P48595 397 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 CLDN12P56749 244 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 GABARAPL2P60520 117 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 RUNX1Q01196 453 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 FHL3Q13643 280 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 KIAA0141Q14154 515 aaPredicted RBP8.16□□□□□ -1.1
CPSF1-203ENST00000527916 MINDY2Q8NBR6 621 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 RBMXL1Q96E39 390 aaKnown RBP8.16□□□□□ -1.1
CPSF1-203ENST00000527916 HDHD3Q9BSH5 251 aaPredicted RBP8.16□□□□□ -1.1
CPSF1-203ENST00000527916 CENPOQ9BU64 300 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 C11orf54Q9H0W9 315 aaPredicted RBP8.16□□□□□ -1.1
CPSF1-203ENST00000527916 NDUFB11Q9NX14 153 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 KCNK7Q9Y2U2 307 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 FRAS1Q86XX4 4008 aa8.16□□□□□ -1.1
CPSF1-203ENST00000527916 TMEM272A0A1B0GTI8 110 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 RRHO14718 337 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 ATP6V0E1O15342 81 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 HSPA12AO43301 675 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 MYL9P24844 172 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 SRSF7Q16629 238 aaKnown RBP eCLIP8.15□□□□□ -1.1
CPSF1-203ENST00000527916 RPL39P5Q59GN2 51 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 C19orf54Q5BKX5 351 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 TMEM65Q6PI78 240 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 FAM131AQ6UXB0 335 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 TCTEX1D1Q8N7M0 179 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 ZNF491Q8N8L2 437 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.15□□□□□ -1.1
CPSF1-203ENST00000527916 OR11H1Q8NG94 326 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 OR4A4PQ8NGN8 299 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 IL17DQ8TAD2 202 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 RAB3CQ96E17 227 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 ABHD14BQ96IU4 210 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 YTHDF1Q9BYJ9 559 aaKnown RBP8.15□□□□□ -1.1
CPSF1-203ENST00000527916 PARP12Q9H0J9 701 aaKnown RBP8.15□□□□□ -1.1
CPSF1-203ENST00000527916 OR1A1Q9P1Q5 309 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 ZNF221Q9UK13 617 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 WASHC3Q9Y3C0 194 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 NUBP2Q9Y5Y2 271 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 TNCP24821 2201 aa8.15□□□□□ -1.1
CPSF1-203ENST00000527916 PCLOQ9Y6V0 5065 aa8.15□□□□□ -1.11
CPSF1-203ENST00000527916 PLECQ15149 4684 aaKnown RBP8.14□□□□□ -1.11
CPSF1-203ENST00000527916 TRAV41A0A0B4J266 112 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 IGKV1-6A0A0C4DH72 117 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 SHISA3A0PJX4 238 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 RBMY1BA6NDE4 496 aaKnown RBP8.14□□□□□ -1.11
CPSF1-203ENST00000527916 RBMY1EA6NEQ0 496 aaKnown RBP8.14□□□□□ -1.11
CPSF1-203ENST00000527916 G3V318 75 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 I3L521 148 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms