RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 KRTAP4-5Q9BYR2 181 aa12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 PARP12Q9H0J9 701 aaKnown RBP12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 ISG20L2Q9H9L3 353 aaKnown RBP12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 TECRQ9NZ01 308 aaKnown RBP12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 DMRT1Q9Y5R6 373 aa12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 MAS1P04201 325 aa12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 IGKV1-16P04430 117 aa12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 CRYGBP07316 175 aa12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 GSTP1P09211 210 aaKnown RBP12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 DEFA5Q01523 94 aa12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 GPR176Q14439 515 aa12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 HMGN3Q15651 99 aa12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 SLC22A6Q4U2R8 563 aa12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 RPL39P5Q59GN2 51 aa12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 DDI2Q5TDH0 399 aa12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 GLDNQ6ZMI3 551 aaPredicted RBP12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 GRPEL2Q8TAA5 225 aa12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 TSEN15Q8WW01 171 aaKnown RBP12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 TRUB1Q8WWH5 349 aaKnown RBP12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 SLC7A6OSQ96CW6 309 aaPredicted RBP12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 WDR89Q96FK6 387 aaPredicted RBP12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 ZNF355PQ9NSJ1 428 aa12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 LRRC42Q9Y546 428 aa12.1□□□□□ -0.47
CHMP4A-203ENST00000527154 C2orf70A6NJV1 201 aa12.09□□□□□ -0.47
CHMP4A-203ENST00000527154 GPX5O75715 221 aa12.09□□□□□ -0.47
CHMP4A-203ENST00000527154 FASP25445 335 aa12.09□□□□□ -0.47
CHMP4A-203ENST00000527154 LINC00336Q6ZUF6 198 aa12.09□□□□□ -0.47
CHMP4A-203ENST00000527154 SLC16A13Q7RTY0 426 aa12.09□□□□□ -0.47
CHMP4A-203ENST00000527154 AMIGO2Q86SJ2 522 aa12.09□□□□□ -0.47
CHMP4A-203ENST00000527154 GALMQ96C23 342 aa12.09□□□□□ -0.47
CHMP4A-203ENST00000527154 TSNAXQ99598 290 aaKnown RBP12.09□□□□□ -0.47
CHMP4A-203ENST00000527154 ALG8Q9BVK2 526 aa12.09□□□□□ -0.47
CHMP4A-203ENST00000527154 KCNIP1Q9NZI2 227 aa12.09□□□□□ -0.47
CHMP4A-203ENST00000527154 ZNF230Q9UIE0 474 aaPredicted RBP12.09□□□□□ -0.47
CHMP4A-203ENST00000527154 PEX16Q9Y5Y5 336 aa12.09□□□□□ -0.47
CHMP4A-203ENST00000527154 ST8SIA5O15466 376 aa12.08□□□□□ -0.48
CHMP4A-203ENST00000527154 IGFBP3P17936 291 aaPredicted RBP12.08□□□□□ -0.48
CHMP4A-203ENST00000527154 BDKRB2P30411 391 aa12.08□□□□□ -0.48
CHMP4A-203ENST00000527154 ADAD2Q8NCV1 583 aaKnown RBP12.08□□□□□ -0.48
CHMP4A-203ENST00000527154 TRBV9A0A0B4J1U6 114 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 A0A0B4J203 849 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 LGALS9O00182 355 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 IGLV2-23P01705 113 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 FOLR2P14207 255 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 EDN2P20800 178 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 FUT3P21217 361 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 CAPGP40121 348 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 SOX2P48431 317 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 SNRPGP62308 76 aaKnown RBP12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 PJVKQ0ZLH3 352 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 MRGPRG-AS1Q2M3A8 158 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 GPR148Q8TDV2 347 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 LGALS12Q96DT0 336 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 Q96M66 194 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 S100A13Q99584 98 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 IMPAD1Q9NX62 359 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 AP4S1Q9Y587 144 aa12.07□□□□□ -0.48
CHMP4A-203ENST00000527154 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.06□□□□□ -0.48
CHMP4A-203ENST00000527154 H7C2Y5 167 aa12.06□□□□□ -0.48
CHMP4A-203ENST00000527154 SPRY2O43597 315 aa12.06□□□□□ -0.48
CHMP4A-203ENST00000527154 CD2P06729 351 aa12.06□□□□□ -0.48
CHMP4A-203ENST00000527154 GUCA2BQ16661 112 aa12.06□□□□□ -0.48
CHMP4A-203ENST00000527154 MEDAGQ5VYS4 303 aa12.06□□□□□ -0.48
CHMP4A-203ENST00000527154 LHFPL3Q86UP9 236 aa12.06□□□□□ -0.48
CHMP4A-203ENST00000527154 PDPNQ86YL7 162 aa12.06□□□□□ -0.48
CHMP4A-203ENST00000527154 TMEM61Q8N0U2 210 aa12.06□□□□□ -0.48
CHMP4A-203ENST00000527154 DYNLRB2Q8TF09 96 aa12.06□□□□□ -0.48
CHMP4A-203ENST00000527154 MRPL48Q96GC5 212 aaKnown RBP12.06□□□□□ -0.48
CHMP4A-203ENST00000527154 MYCBPQ99417 103 aaPredicted RBP12.06□□□□□ -0.48
CHMP4A-203ENST00000527154 ZNF184Q99676 751 aaPredicted RBP12.06□□□□□ -0.48
CHMP4A-203ENST00000527154 OAZ3Q9UMX2 235 aa12.06□□□□□ -0.48
CHMP4A-203ENST00000527154 H3BNX3 289 aa12.05□□□□□ -0.48
CHMP4A-203ENST00000527154 FCGR1AP12314 374 aa12.05□□□□□ -0.48
CHMP4A-203ENST00000527154 LGALS7P47929 136 aa12.05□□□□□ -0.48
CHMP4A-203ENST00000527154 TCTAP57738 103 aa12.05□□□□□ -0.48
CHMP4A-203ENST00000527154 ZNF880Q6PDB4 577 aa12.05□□□□□ -0.48
CHMP4A-203ENST00000527154 TMEM217Q8N7C4 229 aa12.05□□□□□ -0.48
CHMP4A-203ENST00000527154 ZNF383Q8NA42 475 aa12.05□□□□□ -0.48
CHMP4A-203ENST00000527154 KCNG3Q8TAE7 436 aa12.05□□□□□ -0.48
CHMP4A-203ENST00000527154 RNF183Q96D59 192 aa12.05□□□□□ -0.48
CHMP4A-203ENST00000527154 HERC1Q15751 4861 aa12.04□□□□□ -0.48
CHMP4A-203ENST00000527154 UBE2QL1A1L167 161 aa12.04□□□□□ -0.48
CHMP4A-203ENST00000527154 FAM223BA6NKX1 122 aa12.04□□□□□ -0.48
CHMP4A-203ENST00000527154 UBE2CO00762 179 aa12.04□□□□□ -0.48
CHMP4A-203ENST00000527154 PDCD6O75340 191 aa12.04□□□□□ -0.48
CHMP4A-203ENST00000527154 PPP3R1P63098 170 aa12.04□□□□□ -0.48
CHMP4A-203ENST00000527154 ZNF45Q02386 682 aa12.04□□□□□ -0.48
CHMP4A-203ENST00000527154 FAM223AQ8IWN6 122 aa12.04□□□□□ -0.48
CHMP4A-203ENST00000527154 PTX4Q96A99 478 aa12.04□□□□□ -0.48
CHMP4A-203ENST00000527154 ABHD14BQ96IU4 210 aa12.04□□□□□ -0.48
CHMP4A-203ENST00000527154 AKIP1Q9NQ31 210 aa12.04□□□□□ -0.48
CHMP4A-203ENST00000527154 ERVK13-1Q9NX77 482 aa12.04□□□□□ -0.48
CHMP4A-203ENST00000527154 STEAP1Q9UHE8 339 aa12.04□□□□□ -0.48
CHMP4A-203ENST00000527154 KIR2DL5BA0A0G2JN68 375 aa12.03□□□□□ -0.48
CHMP4A-203ENST00000527154 KIR2DL5BA0A0G2JPC4 375 aa12.03□□□□□ -0.48
CHMP4A-203ENST00000527154 NAPSAO96009 420 aa12.03□□□□□ -0.48
CHMP4A-203ENST00000527154 CPEP16870 476 aa12.03□□□□□ -0.48
CHMP4A-203ENST00000527154 CBLN1P23435 193 aa12.03□□□□□ -0.48
CHMP4A-203ENST00000527154 GTF2A1P52655 376 aaPredicted RBP12.03□□□□□ -0.48
CHMP4A-203ENST00000527154 LINC00205P59089 165 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms