RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 LYG1Q8N1E2 194 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 AMER3Q8N944 861 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 CCDC71LQ8N9Z2 235 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 OR11H1Q8NG94 326 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 GPR32P1Q8NGA4 272 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 OR5AU1Q8NGC0 362 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 OR10W1Q8NGF6 305 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 OR11L1Q8NGX0 322 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 OR11H2Q8NH07 326 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 OR8S1Q8NH09 359 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 OR4K13Q8NH42 304 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 OR5K2Q8NHB8 316 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 SGMS2Q8NHU3 365 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 CMTM2Q8TAZ6 248 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 EMG1Q92979 244 aaKnown RBP4.28□□□□□ -1.72
CD44-218ENST00000525469 TSLPQ969D9 159 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 ZMYND19Q96E35 227 aaPredicted RBP4.28□□□□□ -1.72
CD44-218ENST00000525469 PELI1Q96FA3 418 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 IMMP1LQ96LU5 166 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 IL17FQ96PD4 163 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 SPIN2AQ99865 258 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 SPIN2BQ9BPZ2 258 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 PSMG3Q9BT73 122 aaPredicted RBP4.28□□□□□ -1.72
CD44-218ENST00000525469 SCRT1Q9BWW7 348 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 RAB11FIP5Q9BXF6 653 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 EGLN3Q9H6Z9 239 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 CXorf36Q9H7Y0 433 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 UBTD1Q9HAC8 227 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 GPR84Q9NQS5 396 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 SPANXCQ9NY87 97 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 CISD1Q9NZ45 108 aaKnown RBP4.28□□□□□ -1.72
CD44-218ENST00000525469 CLN8Q9UBY8 286 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 SIGLEC7Q9Y286 467 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 DOCK7Q96N67 2140 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 KIAA1549Q9HCM3 1950 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 IGLV3-12A0A075B6K2 115 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 TRBV5-4A0A0C4DH59 114 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 DUXBA0A1W2PPF3 345 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 A0A1W2PRS3 328 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 OR2W5A6NFC9 320 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 SERINC4A6NH21 518 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 ZNF860A6NHJ4 632 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 C17orf112F2Z3M2 114 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 TMEM250H0YL14 139 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 H0YL77 283 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 ZNF207O43670 478 aaKnown RBP4.27□□□□□ -1.73
CD44-218ENST00000525469 FGF17O60258 216 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 C1QCP02747 245 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 MT-ND6P03923 174 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 OR4A8P0C604 315 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 ZNF735P0CB33 412 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 EPORP19235 508 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 NTSP30990 170 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 SFTPDP35247 375 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 PSMB10P40306 273 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 CDKN2AP42771 156 aaKnown RBP4.27□□□□□ -1.73
CD44-218ENST00000525469 GUCA1AP43080 201 aaPredicted RBP4.27□□□□□ -1.73
CD44-218ENST00000525469 OR12D2P58182 307 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 RPS11P62280 158 aaKnown RBP eCLIP4.27□□□□□ -1.73
CD44-218ENST00000525469 COL10A1Q03692 680 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 ZNF85Q03923 595 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 ZNF92Q03936 586 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 TSTA3Q13630 321 aaPredicted RBP4.27□□□□□ -1.73
CD44-218ENST00000525469 RAB31Q13636 194 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 IHHQ14623 411 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 BATFQ16520 125 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 SLC22A6Q4U2R8 563 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 LDLRAD2Q5SZI1 272 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 SPATA46Q5T0L3 261 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 GFI1BQ5VTD9 330 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 FIGLAQ6QHK4 219 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 Q6ZN92 141 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 CYP2G1PQ6ZSU1 146 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 RNF44Q7L0R7 432 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 SLC16A9Q7RTY1 509 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 HOGA1Q86XE5 327 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 ZNF595Q8IYB9 648 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 TMEM99Q8N816 258 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 POC1AQ8NBT0 407 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 CHST4Q8NCG5 386 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 APCDD1LQ8NCL9 501 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 MAPK1IP1LQ8NDC0 245 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 BHLHE23Q8NDY6 225 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 OR4N2Q8NGD1 307 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 OR5A1Q8NGJ0 315 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 OR1L6Q8NGR2 347 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 OR1K1Q8NGR3 316 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 OR2T10Q8NGZ9 312 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 C16orf52Q8NHV5 167 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 DYRK2Q92630 601 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 NEIL2Q969S2 332 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 ERGIC1Q969X5 290 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 FAM46BQ96A09 425 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 SPSB1Q96BD6 273 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 APH1AQ96BI3 265 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 PINX1Q96BK5 328 aaKnown RBP4.27□□□□□ -1.73
CD44-218ENST00000525469 FAM3DQ96BQ1 224 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 SARAFQ96BY9 339 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 GPR146Q96CH1 333 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 ZG16BQ96DA0 208 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms