RNA–Protein interactions for RNA: ENST00000525293.5

CD44-216, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-216ENST00000525293 FAM106AQ4KMX7 169 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 KHDC3LQ587J8 217 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 ZNF684Q5T5D7 378 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 BCL2L15Q5TBC7 163 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 UNQ5815/PRO19632Q6UWF5 114 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 GOLT1AQ6ZVE7 132 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 HIST2H3AQ71DI3 136 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 PRSS48Q7RTY5 328 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 C6orf120Q7Z4R8 191 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 TMEM150AQ86TG1 271 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 PPP1R27Q86WC6 154 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 PRR22Q8IZ63 422 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 SLC22A15Q8IZD6 547 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 HIST3H2BBQ8N257 126 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 TMEM86AQ8N2M4 240 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 ZDHHC22Q8N966 263 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 PLPP5Q8NEB5 264 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 OR11G2Q8NGC1 345 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 OR4K17Q8NGC6 315 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 OR52E2Q8NGJ4 325 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 OR51A4Q8NGJ6 313 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 OR2G3Q8NGZ4 309 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 RHOXF1Q8NHV9 184 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 NEIL3Q8TAT5 605 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 RDH11Q8TC12 318 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 ZNF675Q8TD23 568 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 DOK4Q8TEW6 326 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 FRZBQ92765 325 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 TMEM54Q969K7 222 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 EEF1AKMT3Q96AZ1 226 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 MALSU1Q96EH3 234 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 HYLS1Q96M11 299 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 SIGLEC12Q96PQ1 595 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 KCTD14Q9BQ13 255 aaPredicted RBP1.79□□□□□ -2.12
CD44-216ENST00000525293 MIEN1Q9BRT3 115 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 DERL1Q9BUN8 251 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 TM2D1Q9BX74 207 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 SELENOIQ9C0D9 397 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 OR8D2Q9GZM6 311 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 SLC25A31Q9H0C2 315 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 ZBP1Q9H171 429 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 ZNF442Q9H7R0 627 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 REEP1Q9H902 201 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 ISG20L2Q9H9L3 353 aaKnown RBP1.79□□□□□ -2.12
CD44-216ENST00000525293 CXorf21Q9HAI6 301 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 NRN1Q9NPD7 142 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 ACER3Q9NUN7 267 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 ASF1BQ9NVP2 202 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 ZNF226Q9NYT6 803 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 TAS2R5Q9NYW4 299 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 TVP23BQ9NYZ1 205 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 RPS6KB2Q9UBS0 482 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 IL36AQ9UHA7 158 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 ANXA10Q9UJ72 324 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 CELA1Q9UNI1 258 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 OARD1Q9Y530 152 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 AP4S1Q9Y587 144 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 OVOS2A0A0G2JMS6 1433 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 NAIPQ13075 1403 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 SSH2Q76I76 1423 aa1.79□□□□□ -2.12
CD44-216ENST00000525293 DICER1Q9UPY3 1922 aaKnown RBP1.79□□□□□ -2.12
CD44-216ENST00000525293 PRRC2AP48634 2157 aaKnown RBP1.79□□□□□ -2.12
CD44-216ENST00000525293 YLPM1P49750 1951 aaKnown RBP1.78□□□□□ -2.12
CD44-216ENST00000525293 KDM5AP29375 1690 aaKnown RBP1.78□□□□□ -2.12
CD44-216ENST00000525293 POLA1P09884 1462 aaPredicted RBP1.78□□□□□ -2.12
CD44-216ENST00000525293 FANCD2Q9BXW9 1451 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 CEP164Q9UPV0 1460 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 HFM1A2PYH4 1435 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 NFASCO94856 1347 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 BORCS7-ASMTA0A0B4J1R7 106 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 A0A0G2JMM0 328 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 A0A1W2PPB8 328 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 hADV38S2A0JD32 116 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 FAM183AA6NL82 134 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 ZNF705GA8MUZ8 300 aaPredicted RBP1.78□□□□□ -2.12
CD44-216ENST00000525293 KIR3DP1A8MWS1 328 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 SMKR1H3BMG3 65 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 CCL21O00585 134 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 OR2T1O43869 369 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 ZNF354AO60765 605 aaPredicted RBP1.78□□□□□ -2.12
CD44-216ENST00000525293 CDRT1O95170 752 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 LYPD3O95274 346 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 SOX14O95416 240 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 OR2H2O95918 312 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 CXorf1O96002 111 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 LALBAP00709 142 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 TTRP02766 147 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 DBIP07108 87 aaKnown RBP1.78□□□□□ -2.12
CD44-216ENST00000525293 IL3P08700 152 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 NMBP08949 121 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 OR4A8P0C604 315 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 AKAIN1P0CW23 69 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 ZNF728P0DKX0 622 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 CT45A10P0DMU9 189 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 LAMP1P11279 417 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 CD99P14209 185 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 PGAM2P15259 253 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 CD1DP15813 335 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 KLK2P20151 261 aa1.78□□□□□ -2.12
CD44-216ENST00000525293 EVI2AP22794 236 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms