RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ROPN1LQ96C74 230 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 FCRL1Q96LA6 429 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 KLF6Q99612 283 aaPredicted RBP3.44□□□□□ -1.86
CD44-213ENST00000525209 OCR1Q9BZK8 76 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 SPHK2Q9NRA0 654 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 PRTFDC1Q9NRG1 225 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 WASHC3Q9Y3C0 194 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 HES2Q9Y543 173 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 BAZ2AQ9UIF9 1905 aaKnown RBP3.44□□□□□ -1.86
CD44-213ENST00000525209 IGSF9BQ9UPX0 1349 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 SCN7AQ01118 1682 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 ZNF831Q5JPB2 1677 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 GREB1LQ9C091 1923 aaPredicted RBP3.43□□□□□ -1.86
CD44-213ENST00000525209 IGHV4-30-2A0A087WSY4 118 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 SMIM26A0A096LP01 95 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 A0A096LPI6 279 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 TRAV8-3A0A0A6YYJ7 113 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 IGHV7-81A0A0B4J1V7 117 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 TRAV26-2A0A0B4J265 109 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 IGHV1-69DA0A0B4J2H0 117 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 LY6G6EA0A0G2JKS1 128 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 PVALEFA0A1B0GWK0 134 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 A0A1B0GX51 115 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 SIGLEC16A6NMB1 481 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 PRAC2D3DTV9 90 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 K7EPK0 472 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 UPK1AO00322 258 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 SNAP91O60641 907 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 KCNK2O95069 426 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 IGF2P01344 180 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 SERPINE1P05121 402 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 CTLA4P16410 223 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 APLNRP35414 380 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 CTBP2P56545 445 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 PIGPP57054 158 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 KLF3P57682 345 aaPredicted RBP3.43□□□□□ -1.86
CD44-213ENST00000525209 GNG2P59768 71 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 RPS20P60866 119 aaKnown RBP3.43□□□□□ -1.86
CD44-213ENST00000525209 NCALDP61601 193 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 RRAS2P62070 204 aaPredicted RBP3.43□□□□□ -1.86
CD44-213ENST00000525209 FABP5Q01469 135 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 FHL1Q13642 323 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 FBXL19-AS1Q494R0 122 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 C6orf99Q4VX62 202 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 ATP6AP1LQ52LC2 224 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 REG3GQ6UW15 175 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 Q6ZRU5 148 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 CLEC20AQ6ZU45 233 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 STRADAQ7RTN6 431 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 SLC25A45Q8N413 288 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 DEFB123Q8N688 67 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 GDPD1Q8N9F7 314 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 CSNK1G2-AS1Q8NCQ2 148 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 OR13C4Q8NGS5 318 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 OR5K1Q8NHB7 308 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 NTN5Q8WTR8 489 aaPredicted RBP3.43□□□□□ -1.86
CD44-213ENST00000525209 CT55Q8WUE5 264 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 FAM151AQ8WW52 585 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 TMEM159Q96B96 161 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 C14orf144Q96I85 54 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 SLC35E1Q96K37 410 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 SIGLEC12Q96PQ1 595 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 SERPINI1Q99574 410 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 DOHHQ9BU89 302 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 PBDC1Q9BVG4 233 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 MND1Q9BWT6 205 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 CLEC7AQ9BXN2 247 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 KRTAP17-1Q9BYP8 105 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 SLC29A3Q9BZD2 475 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 TMEM222Q9H0R3 208 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 HMG20AQ9NP66 347 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 RBM12B-AS1Q9P1G2 102 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 DPM3Q9P2X0 92 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 HSPB8Q9UJY1 196 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 RBM7Q9Y580 266 aaKnown RBP3.43□□□□□ -1.86
CD44-213ENST00000525209 BCORQ6W2J9 1755 aa3.43□□□□□ -1.86
CD44-213ENST00000525209 IGKV1-8A0A0C4DH67 115 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 TMEM189A5PLL7 270 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 MPTX1A8MV57 137 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 KLLNB2CW77 178 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 SMIM1B2RUZ4 78 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 J3KT08 172 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 ZNF780AO75290 641 aaPredicted RBP3.42□□□□□ -1.86
CD44-213ENST00000525209 BANF1O75531 89 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 POP7O75817 140 aaKnown RBP3.42□□□□□ -1.86
CD44-213ENST00000525209 TNFSF15O95150 251 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 SLPIP03973 132 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 IFNA4P05014 189 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 S100A8P05109 93 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 DBIP07108 87 aaKnown RBP3.42□□□□□ -1.86
CD44-213ENST00000525209 LGALS1P09382 135 aaKnown RBP3.42□□□□□ -1.86
CD44-213ENST00000525209 CECR9P0C854 216 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 UBBP0CG47 229 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 IGHV3-43DP0DP04 118 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 ZNF25P17030 456 aaPredicted RBP3.42□□□□□ -1.86
CD44-213ENST00000525209 CCL1P22362 96 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 GADD45AP24522 165 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 IL2RGP31785 369 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 MDH2P40926 338 aaKnown RBP3.42□□□□□ -1.86
CD44-213ENST00000525209 GFERP55789 205 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms