RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 TMEM147Q9BVK8 224 aa3.75□□□□□ -1.81
USP47-204ENST00000525078 MS4A8Q9BY19 250 aa3.75□□□□□ -1.81
USP47-204ENST00000525078 ZNF331Q9NQX6 463 aaPredicted RBP3.75□□□□□ -1.81
USP47-204ENST00000525078 C21orf62Q9NYP8 219 aa3.75□□□□□ -1.81
USP47-204ENST00000525078 ZNRD1Q9P1U0 126 aa3.75□□□□□ -1.81
USP47-204ENST00000525078 HSPB11Q9Y547 144 aa3.75□□□□□ -1.81
USP47-204ENST00000525078 POLR1AO95602 1720 aaPredicted RBP3.75□□□□□ -1.81
USP47-204ENST00000525078 PCSK5Q92824 1860 aa3.75□□□□□ -1.81
USP47-204ENST00000525078 CECR2Q9BXF3 1484 aa3.74□□□□□ -1.81
USP47-204ENST00000525078 ARHGAP23Q9P227 1491 aa3.74□□□□□ -1.81
USP47-204ENST00000525078 TMEM223A0PJW6 202 aa3.74□□□□□ -1.81
USP47-204ENST00000525078 ZNF729A6NN14 1252 aaPredicted RBP3.74□□□□□ -1.81
USP47-204ENST00000525078 LTAP01374 205 aa3.74□□□□□ -1.81
USP47-204ENST00000525078 SERPINE1P05121 402 aa3.74□□□□□ -1.81
USP47-204ENST00000525078 CA7P43166 264 aa3.74□□□□□ -1.81
USP47-204ENST00000525078 RWDD2BP57060 319 aa3.74□□□□□ -1.81
USP47-204ENST00000525078 RHOBP62745 196 aa3.74□□□□□ -1.81
USP47-204ENST00000525078 BTN1A1Q13410 526 aa3.74□□□□□ -1.81
USP47-204ENST00000525078 DAZ4Q86SG3 579 aaKnown RBP3.74□□□□□ -1.81
USP47-204ENST00000525078 C15orf56Q8N910 161 aa3.74□□□□□ -1.81
USP47-204ENST00000525078 BORCS5Q969J3 196 aa3.74□□□□□ -1.81
USP47-204ENST00000525078 RBMXL1Q96E39 390 aaKnown RBP3.74□□□□□ -1.81
USP47-204ENST00000525078 COMMD5Q9GZQ3 224 aa3.74□□□□□ -1.81
USP47-204ENST00000525078 DAZ1Q9NQZ3 744 aaKnown RBP3.74□□□□□ -1.81
USP47-204ENST00000525078 PRTFDC1Q9NRG1 225 aa3.74□□□□□ -1.81
USP47-204ENST00000525078 TMEM38BQ9NVV0 291 aa3.74□□□□□ -1.81
USP47-204ENST00000525078 CFAP43Q8NDM7 1665 aa3.74□□□□□ -1.81
USP47-204ENST00000525078 MAPKBP1O60336 1514 aa3.74□□□□□ -1.81
USP47-204ENST00000525078 IGHV1-69-2A0A0G2JMI3 117 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 TRAPPC13A5PLN9 417 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 KRTAP29-1A8MX34 341 aaPredicted RBP3.73□□□□□ -1.81
USP47-204ENST00000525078 GSTZ1O43708 216 aaPredicted RBP3.73□□□□□ -1.81
USP47-204ENST00000525078 PFDN1O60925 122 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 SRSF10O75494 262 aaKnown RBP3.73□□□□□ -1.81
USP47-204ENST00000525078 OPN1SWP03999 348 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 ZNF883P0CG24 379 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 SCGB1A1P11684 91 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 CDK2P24941 298 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 CNTFRP26992 372 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 ERP29P30040 261 aaKnown RBP3.73□□□□□ -1.81
USP47-204ENST00000525078 OR10J1P30954 320 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 PPP1CCP36873 323 aaKnown RBP3.73□□□□□ -1.81
USP47-204ENST00000525078 LINC00313P59037 77 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 RPS20P60866 119 aaKnown RBP3.73□□□□□ -1.81
USP47-204ENST00000525078 CAV1Q03135 178 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 SYCNQ0VAF6 134 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 KLHL12Q53G59 568 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 TIFABQ6ZNK6 161 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 NTM-AS1Q6ZSK4 140 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 GDPD1Q8N9F7 314 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 OR4A5Q8NH83 315 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 SKA2Q8WVK7 121 aaPredicted RBP3.73□□□□□ -1.81
USP47-204ENST00000525078 LZICQ8WZA0 190 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 C12orf43Q96C57 262 aaKnown RBP3.73□□□□□ -1.81
USP47-204ENST00000525078 NARS2Q96I59 477 aaKnown RBP3.73□□□□□ -1.81
USP47-204ENST00000525078 PBDC1Q9BVG4 233 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 KCNIP2Q9NS61 270 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 ZNF492Q9P255 531 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 RWDD2AQ9UIY3 292 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 GINS2Q9Y248 185 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 ERGIC3Q9Y282 383 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 OR51B4Q9Y5P0 310 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 CSAG2Q9Y5P2 127 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 TMEM14AQ9Y6G1 99 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 TOP2BQ02880 1626 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 ABCA5Q8WWZ7 1642 aa3.73□□□□□ -1.81
USP47-204ENST00000525078 DCCP43146 1447 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 APOMO95445 188 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 GPR75O95800 540 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 IGLV1-47P01700 117 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 CD28P10747 220 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 IL1RNP18510 177 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 PHBP35232 272 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 RPS10P46783 165 aaKnown RBP3.72□□□□□ -1.81
USP47-204ENST00000525078 GNB2P62879 340 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 GNG5P63218 68 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 FLI1Q01543 452 aaPredicted RBP3.72□□□□□ -1.81
USP47-204ENST00000525078 GNA12Q03113 381 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 APOFQ13790 326 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 PLPPR5Q32ZL2 321 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 ZFP1Q6P2D0 407 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 DHFR2Q86XF0 187 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 C1orf174Q8IYL3 243 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 UMODL1-AS1Q8N2C9 162 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 EIF4E3Q8N5X7 224 aaKnown RBP3.72□□□□□ -1.81
USP47-204ENST00000525078 FER1L6-AS1Q8NA97 138 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 OR11H6Q8NGC7 330 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 ROPN1LQ96C74 230 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 RPS6KB2Q9UBS0 482 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 SSR3Q9UNL2 185 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 RTL1A6NKG5 1358 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 NCAPD3P42695 1498 aa3.72□□□□□ -1.81
USP47-204ENST00000525078 SOGA1O94964 1423 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 hCG_1818297A0A087WSY0 165 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 TMEM150BA6NC51 233 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 MAP1LC3B2A6NCE7 125 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 LINC00862A6NCI5 91 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 A8MT66 165 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 K7ERS5 55 aa3.71□□□□□ -1.82
USP47-204ENST00000525078 PIRO00625 290 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms