RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ZNF816Q0VGE8 651 aaPredicted RBP3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 LSAMPQ13449 338 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 ZNF79Q15937 498 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 SRSF7Q16629 238 aaKnown RBP eCLIP3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 TMEM30BQ3MIR4 351 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 SCGB2B2Q4G0G5 96 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 ARSJQ5FYB0 599 aaPredicted RBP3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 PYHIN1Q6K0P9 492 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 C10orf99Q6UWK7 81 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 ZNF818PQ6ZRF7 136 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 Q6ZS49 121 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 ZNF833PQ6ZTB9 187 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 ZNF554Q86TJ5 538 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 CCDC190Q86UF4 302 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 OR8H3Q8N146 312 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 LINC00311Q8N616 119 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 C8orf31Q8N9H6 132 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 BVESQ8NE79 360 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 OR6Q1Q8NGQ2 317 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 FAM216AQ8WUB2 273 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 EDARADDQ8WWZ3 215 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 TMEM158Q8WZ71 300 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 CMTM3Q96MX0 182 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 SLC5A7Q9GZV3 580 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 FXYD6Q9H0Q3 95 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 MMP27Q9H306 513 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 ZNF702PQ9H963 129 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 TPSG1Q9NRR2 321 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 TAS2R8Q9NYW2 309 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 NDUFA13Q9P0J0 144 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 ANAPC10Q9UM13 185 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 OR2W1Q9Y3N9 320 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 POMT1Q9Y6A1 747 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 OR5H14A6NHG9 310 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 FAM90A9PA6NNJ1 464 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 VGLL3A8MV65 326 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 OOSP1A8MZH6 123 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 GABARAPH6UMI1 98 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 CLDN34H7C241 214 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 SULT1C2O00338 296 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 FCN1O00602 326 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 FCGR3BO75015 233 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 DIRAS3O95661 229 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 RAB3DO95716 219 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 MOSP00540 346 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 RLN1P04808 185 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 IFNA6P05013 189 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 CTXN2P0C2S0 81 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 VSIG10L2P0DP72 767 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 HKR1P10072 659 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 PGAM2P15259 253 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 ARHGDIBP52566 201 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 ZNF137PP52743 207 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 TAS2R46P59540 309 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 ACTBP60709 375 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 HERV-K104P61576 105 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 RPS16P62249 146 aaKnown RBP3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 DYRK1AQ13627 763 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 MMDQ15546 238 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 BAK1Q16611 211 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 PHLDA2Q53GA4 152 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 AWAT1Q58HT5 328 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 RNASE10Q5GAN6 216 aaKnown RBP3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 CCDC144NLQ6NUI1 221 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 STEAP1BQ6NZ63 245 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 IDO2Q6ZQW0 420 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 LCNL1Q6ZST4 164 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 SSX9Q7RTT3 188 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 OVCH2Q7RTZ1 564 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 VKORC1L1Q8N0U8 176 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 Q8N402 240 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 MFSD4AQ8N468 514 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 TMEM86BQ8N661 226 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 ZNF645Q8N7E2 425 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 C5orf56Q8N8D9 126 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 Q8N9W7 124 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 OR6F1Q8NGZ6 308 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 OR2T10Q8NGZ9 312 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 OR51H1Q8NH63 302 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 OR5R1Q8NH85 324 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 LINC01006Q8NI28 216 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 MARCH1Q8TCQ1 289 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 SMIM4Q8WVI0 70 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 TCTEX1D2Q8WW35 142 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 NOL4LQ96MY1 436 aaPredicted RBP3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 RBM14Q96PK6 669 aaKnown RBP3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 S1PR3Q99500 378 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 SDHCQ99643 169 aaPredicted RBP3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 SOSTQ9BQB4 213 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 HSPB9Q9BQS6 159 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 THAP7Q9BT49 309 aaPredicted RBP3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 SRRQ9GZT4 340 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 FBXL15Q9H469 300 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 SCPEP1Q9HB40 452 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 PLSCR3Q9NRY6 295 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 SLC35D1Q9NTN3 355 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 MCUBQ9NWR8 336 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 PIPOXQ9P0Z9 390 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 MTFP1Q9UDX5 166 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 GAB2Q9UQC2 676 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms