RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 HBG2P69892 147 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 CEACAM21Q3KPI0 293 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 CXorf67Q86X51 503 aaPredicted RBP11.12□□□□□ -0.63
CAPN1-202ENST00000524773 MCEMP1Q8IX19 187 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 ACTR3CQ9C0K3 210 aaPredicted RBP11.12□□□□□ -0.63
CAPN1-202ENST00000524773 TP53TG5Q9Y2B4 290 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 NCOR1O75376 2440 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 B4E171 279 aa11.11□□□□□ -0.63
CAPN1-202ENST00000524773 DEGS1O15121 323 aa11.11□□□□□ -0.63
CAPN1-202ENST00000524773 HRASP01112 189 aa11.11□□□□□ -0.63
CAPN1-202ENST00000524773 P04436 131 aa11.11□□□□□ -0.63
CAPN1-202ENST00000524773 TSPAN7P41732 249 aa11.11□□□□□ -0.63
CAPN1-202ENST00000524773 RPL30P62888 115 aaKnown RBP11.11□□□□□ -0.63
CAPN1-202ENST00000524773 Q0VFX4 171 aa11.11□□□□□ -0.63
CAPN1-202ENST00000524773 ZNF705AQ6ZN79 300 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-202ENST00000524773 TPRX1Q8N7U7 411 aa11.11□□□□□ -0.63
CAPN1-202ENST00000524773 POLR3KQ9Y2Y1 108 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-202ENST00000524773 IGHV3-13P01766 116 aa11.11□□□□□ -0.63
CAPN1-202ENST00000524773 IGHV3-7P01780 117 aa11.11□□□□□ -0.63
CAPN1-202ENST00000524773 COX5BP10606 129 aa11.11□□□□□ -0.63
CAPN1-202ENST00000524773 IL3RAP26951 378 aa11.11□□□□□ -0.63
CAPN1-202ENST00000524773 DRAM1Q8N682 238 aa11.11□□□□□ -0.63
CAPN1-202ENST00000524773 ABHD14BQ96IU4 210 aa11.11□□□□□ -0.63
CAPN1-202ENST00000524773 CTDSP1Q9GZU7 261 aa11.11□□□□□ -0.63
CAPN1-202ENST00000524773 PATZ1Q9HBE1 687 aaKnown RBP11.11□□□□□ -0.63
CAPN1-202ENST00000524773 IFNA1P01562 189 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 S100GP29377 79 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 LTC4SQ16873 150 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 FAM58AQ8N1B3 248 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 TMEM170AQ8WVE7 144 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 TMEM9BQ9NQ34 198 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 C19orf67A6NJJ6 358 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 DEFB108AA8MXU0 73 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 NDUFB4O95168 129 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 PCBD1P61457 104 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 RNASEH2CQ8TDP1 164 aaKnown RBP11.1□□□□□ -0.63
CAPN1-202ENST00000524773 SPSB4Q96A44 273 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 P2RX4Q99571 388 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 SF3B5Q9BWJ5 86 aaKnown RBP11.1□□□□□ -0.63
CAPN1-202ENST00000524773 C12orf49Q9H741 205 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 FKBP11Q9NYL4 201 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 OR6C3Q9NZP0 311 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 IGHV3-43A0A0B4J1X8 118 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 DUXBA0A1W2PPF3 345 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 IGHV3-43DP0DP04 118 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 EDDM3BP56851 147 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 ACTL10Q5JWF8 245 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 ASPHD1Q5U4P2 390 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 TCEAL6Q6IPX3 200 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 AGBL5Q8NDL9 886 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 TMEM18Q96B42 140 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 PPIAL4AQ9Y536 164 aa11.1□□□□□ -0.63
CAPN1-202ENST00000524773 FAM166BA8MTA8 275 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 C11orf94C9JXX5 98 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 F2Z2F3 143 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 SPINK4O60575 86 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 PDGFBP01127 241 aaPredicted RBP11.09□□□□□ -0.63
CAPN1-202ENST00000524773 SERF2P84101 59 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 ALKBH6Q3KRA9 238 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 C5orf30Q96GV9 206 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 NOL4LQ96MY1 436 aaPredicted RBP11.09□□□□□ -0.63
CAPN1-202ENST00000524773 PYGO2Q9BRQ0 406 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 PSMG3Q9BT73 122 aaPredicted RBP11.09□□□□□ -0.63
CAPN1-202ENST00000524773 SH2D2AQ9NP31 389 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 TRAPPC1Q9Y5R8 145 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 SVILO95425 2214 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 S1PR2O95136 353 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 CNN1P51911 297 aaKnown RBP11.09□□□□□ -0.63
CAPN1-202ENST00000524773 RNPS1Q15287 305 aaKnown RBP11.09□□□□□ -0.63
CAPN1-202ENST00000524773 OR52L2PQ8NGH6 319 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 OR5A2Q8NGI9 324 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 IFI44Q8TCB0 444 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 TBX15Q96SF7 602 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 FAM234AQ9H0X4 552 aa11.09□□□□□ -0.63
CAPN1-202ENST00000524773 RBFOX2O43251 390 aaKnown RBP eCLIP11.08□□□□□ -0.641e-5■■■■□ 19.7
CAPN1-202ENST00000524773 RFESDQ8TAC1 157 aa11.08□□□□□ -0.64
CAPN1-202ENST00000524773 PRDM14Q9GZV8 571 aa11.08□□□□□ -0.64
CAPN1-202ENST00000524773 ZNF391Q9UJN7 358 aa11.08□□□□□ -0.64
CAPN1-202ENST00000524773 GJE1A6NN92 205 aa11.08□□□□□ -0.64
CAPN1-202ENST00000524773 PATE3B3GLJ2 98 aa11.08□□□□□ -0.64
CAPN1-202ENST00000524773 OR2H2O95918 312 aa11.08□□□□□ -0.64
CAPN1-202ENST00000524773 NPSP0C0P6 89 aa11.08□□□□□ -0.64
CAPN1-202ENST00000524773 CTXN2P0C2S0 81 aa11.08□□□□□ -0.64
CAPN1-202ENST00000524773 GNB1P62873 340 aa11.08□□□□□ -0.64
CAPN1-202ENST00000524773 Q6ZS49 121 aa11.08□□□□□ -0.64
CAPN1-202ENST00000524773 COLCA1Q6ZS62 124 aa11.08□□□□□ -0.64
CAPN1-202ENST00000524773 GBGT1Q8N5D6 347 aa11.08□□□□□ -0.64
CAPN1-202ENST00000524773 WDYHV1Q96HA8 205 aa11.08□□□□□ -0.64
CAPN1-202ENST00000524773 OR2D2Q9H210 308 aa11.08□□□□□ -0.64
CAPN1-202ENST00000524773 PAM16Q9Y3D7 125 aa11.08□□□□□ -0.64
CAPN1-202ENST00000524773 ODAMA1E959 279 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 C17orf98A8MV24 154 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 CDIPTO14735 213 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 GRPP07492 148 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 CBLN1P23435 193 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 SRD5A2P31213 254 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 CDKN1AP38936 164 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 LYSMD4Q5XG99 296 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 DBX2Q6ZNG2 339 aa11.07□□□□□ -0.64
CAPN1-202ENST00000524773 MAFAQ8NHW3 353 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms