RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CRIP2P52943 208 aaPredicted RBP11.86□□□□□ -0.51
MRPS28-209ENST00000522987 RPS16P62249 146 aaKnown RBP11.86□□□□□ -0.51
MRPS28-209ENST00000522987 TMEM267Q0VDI3 215 aaPredicted RBP11.86□□□□□ -0.51
MRPS28-209ENST00000522987 RCN1Q15293 331 aa11.86□□□□□ -0.51
MRPS28-209ENST00000522987 LY6G6FQ5SQ64 297 aa11.86□□□□□ -0.51
MRPS28-209ENST00000522987 C1orf100Q5SVJ3 147 aa11.86□□□□□ -0.51
MRPS28-209ENST00000522987 CEACAM19Q7Z692 300 aa11.86□□□□□ -0.51
MRPS28-209ENST00000522987 OR5T1Q8NG75 326 aa11.86□□□□□ -0.51
MRPS28-209ENST00000522987 ZMAT4Q9H898 229 aa11.86□□□□□ -0.51
MRPS28-209ENST00000522987 LRRC42Q9Y546 428 aa11.86□□□□□ -0.51
MRPS28-209ENST00000522987 DYNC2H1Q8NCM8 4307 aaKnown RBP11.86□□□□□ -0.51
MRPS28-209ENST00000522987 RYR2Q92736 4967 aa11.85□□□□□ -0.51
MRPS28-209ENST00000522987 SLC25A17O43808 307 aa11.85□□□□□ -0.51
MRPS28-209ENST00000522987 PROP1O75360 226 aa11.85□□□□□ -0.51
MRPS28-209ENST00000522987 IGKV1-16P04430 117 aa11.85□□□□□ -0.51
MRPS28-209ENST00000522987 HSPB1P04792 205 aaKnown RBP11.85□□□□□ -0.51
MRPS28-209ENST00000522987 OR8U9P0C7N5 309 aa11.85□□□□□ -0.51
MRPS28-209ENST00000522987 HLA-DRB3P79483 266 aa11.85□□□□□ -0.51
MRPS28-209ENST00000522987 FAM71F2Q6NXP2 309 aa11.85□□□□□ -0.51
MRPS28-209ENST00000522987 ZNF880Q6PDB4 577 aa11.85□□□□□ -0.51
MRPS28-209ENST00000522987 KCNG3Q8TAE7 436 aa11.85□□□□□ -0.51
MRPS28-209ENST00000522987 TMEM203Q969S6 136 aa11.85□□□□□ -0.51
MRPS28-209ENST00000522987 TMEM14DPA8MWL7 114 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 PTGES3LE9PB15 166 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 EBAG9O00559 213 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 ARPC1BO15143 372 aaKnown RBP11.84□□□□□ -0.51
MRPS28-209ENST00000522987 CD1AP06126 327 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 CD3GP09693 182 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 APELAP0DMC3 54 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 IGHV4-30-4P0DP06 118 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 MC5RP33032 325 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 CLDN12P56749 244 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 QRFPP83859 136 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 PJVKQ0ZLH3 352 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 HSD17B12Q53GQ0 312 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 CD200R1LQ6Q8B3 271 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 ZNF383Q8NA42 475 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 OR5AN1Q8NGI8 311 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 THRSPQ92748 146 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 FLYWCH2Q96CP2 140 aaKnown RBP11.84□□□□□ -0.51
MRPS28-209ENST00000522987 RHOVQ96L33 236 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 GFI1Q99684 422 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 AGMATQ9BSE5 352 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 TM2D1Q9BX74 207 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 LPAR5Q9H1C0 372 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 ADAM30Q9UKF2 790 aa11.84□□□□□ -0.51
MRPS28-209ENST00000522987 M0R1X1 148 aa11.83□□□□□ -0.52
MRPS28-209ENST00000522987 SLC22A1O15245 554 aa11.83□□□□□ -0.52
MRPS28-209ENST00000522987 SRMP19623 302 aa11.83□□□□□ -0.52
MRPS28-209ENST00000522987 VEGFCP49767 419 aa11.83□□□□□ -0.52
MRPS28-209ENST00000522987 FXYD3Q14802 87 aa11.83□□□□□ -0.52
MRPS28-209ENST00000522987 MED22Q15528 200 aa11.83□□□□□ -0.52
MRPS28-209ENST00000522987 MOB1BQ7L9L4 216 aa11.83□□□□□ -0.52
MRPS28-209ENST00000522987 ANKRD13BQ86YJ7 626 aa11.83□□□□□ -0.52
MRPS28-209ENST00000522987 PACRGLQ8N7B6 248 aa11.83□□□□□ -0.52
MRPS28-209ENST00000522987 TCTEX1D1Q8N7M0 179 aa11.83□□□□□ -0.52
MRPS28-209ENST00000522987 PLGRKTQ9HBL7 147 aa11.83□□□□□ -0.52
MRPS28-209ENST00000522987 PLCXD1Q9NUJ7 323 aa11.83□□□□□ -0.52
MRPS28-209ENST00000522987 FKBP14Q9NWM8 211 aa11.83□□□□□ -0.52
MRPS28-209ENST00000522987 ZNF221Q9UK13 617 aa11.83□□□□□ -0.52
MRPS28-209ENST00000522987 AK6Q9Y3D8 172 aaKnown RBP11.83□□□□□ -0.52
MRPS28-209ENST00000522987 IGKV1-6A0A0C4DH72 117 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 RBBP9O75884 186 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 CNIH1O95406 144 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 BPNT1O95861 308 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 CDK1P06493 297 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 ZBTB25P24278 435 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 CD40LGP29965 261 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 PLA2G7Q13093 441 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 AKIRIN2Q53H80 203 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 LIPKQ5VXJ0 399 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 PYHIN1Q6K0P9 492 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 ZNF562Q6V9R5 426 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 Q8N1Y9 231 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 FBLIM1Q8WUP2 373 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 EDARADDQ8WWZ3 215 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 ARHGAP5-AS1Q96IT6 56 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 ELOVL1Q9BW60 279 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 MND1Q9BWT6 205 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 PECRQ9BY49 303 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 Q9N2K0 584 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 SLC35D1Q9NTN3 355 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 STUB1Q9UNE7 303 aa11.82□□□□□ -0.52
MRPS28-209ENST00000522987 C13orf42A0A1B0GVH6 325 aa11.81□□□□□ -0.52
MRPS28-209ENST00000522987 APOA2P02652 100 aa11.81□□□□□ -0.52
MRPS28-209ENST00000522987 TFAP2AP05549 437 aa11.81□□□□□ -0.52
MRPS28-209ENST00000522987 ARSBP15848 533 aa11.81□□□□□ -0.52
MRPS28-209ENST00000522987 RPS25P62851 125 aaKnown RBP11.81□□□□□ -0.52
MRPS28-209ENST00000522987 SSBP2P81877 361 aaPredicted RBP11.81□□□□□ -0.52
MRPS28-209ENST00000522987 ADAMTSL5Q6ZMM2 481 aa11.81□□□□□ -0.52
MRPS28-209ENST00000522987 MS4A15Q8N5U1 240 aa11.81□□□□□ -0.52
MRPS28-209ENST00000522987 OR6M1Q8NGM8 313 aa11.81□□□□□ -0.52
MRPS28-209ENST00000522987 PHYHIPQ92561 330 aa11.81□□□□□ -0.52
MRPS28-209ENST00000522987 TSNAXQ99598 290 aaKnown RBP11.81□□□□□ -0.52
MRPS28-209ENST00000522987 CMSS1Q9BQ75 279 aaKnown RBP11.81□□□□□ -0.52
MRPS28-209ENST00000522987 RDH8Q9NYR8 311 aa11.81□□□□□ -0.52
MRPS28-209ENST00000522987 LSM2Q9Y333 95 aaKnown RBP11.81□□□□□ -0.52
MRPS28-209ENST00000522987 BET1O15155 118 aa11.8□□□□□ -0.52
MRPS28-209ENST00000522987 IGLV1-51P01701 117 aa11.8□□□□□ -0.52
MRPS28-209ENST00000522987 TRBV12-3P01733 135 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms