RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ELL3Q9HB65 397 aaPredicted RBP2.52□□□□□ -2.01
VPS13B-209ENST00000521559 PATZ1Q9HBE1 687 aaKnown RBP2.52□□□□□ -2.01
VPS13B-209ENST00000521559 HMG20AQ9NP66 347 aa2.52□□□□□ -2.01
VPS13B-209ENST00000521559 RBFOX1Q9NWB1 397 aaKnown RBP2.52□□□□□ -2.01
VPS13B-209ENST00000521559 IL36GQ9NZH8 169 aa2.52□□□□□ -2.01
VPS13B-209ENST00000521559 KAAG1Q9UBP8 84 aa2.52□□□□□ -2.01
VPS13B-209ENST00000521559 GLS2Q9UI32 602 aa2.52□□□□□ -2.01
VPS13B-209ENST00000521559 ZNF222Q9UK12 451 aa2.52□□□□□ -2.01
VPS13B-209ENST00000521559 MPDZO75970 2070 aa2.52□□□□□ -2.01
VPS13B-209ENST00000521559 SPTAN1Q13813 2472 aaKnown RBP2.52□□□□□ -2.01
VPS13B-209ENST00000521559 USP9YO00507 2555 aaPredicted RBP2.52□□□□□ -2.01
VPS13B-209ENST00000521559 MYO18BQ8IUG5 2567 aa2.52□□□□□ -2.01
VPS13B-209ENST00000521559 SPTBN1Q01082 2364 aaKnown RBP2.51□□□□□ -2.01
VPS13B-209ENST00000521559 HELZ2Q9BYK8 2649 aaKnown RBP2.51□□□□□ -2.01
VPS13B-209ENST00000521559 DOPEY2Q9Y3R5 2298 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 A0A087X0K7 114 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 PPIAL4CA0A0B4J2A2 164 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 A8MU10 97 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 TMEM14DPA8MWL7 114 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 A8MXK9 166 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 B4DSR2 109 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 K7N7A8 449 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 AIPO00170 330 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 SH2D1BO14796 132 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 SIGLEC5O15389 551 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 BCL2L11O43521 198 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 ZNF737O75373 536 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 FOXH1O75593 365 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 ECDO95905 644 aaPredicted RBP2.51□□□□□ -2.01
VPS13B-209ENST00000521559 HAND1O96004 215 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 IGHV2-5P01817 119 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 TFF1P04155 84 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 CALCBP10092 127 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 CD99P14209 185 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 RPS2P15880 293 aaKnown RBP2.51□□□□□ -2.01
VPS13B-209ENST00000521559 PRKACAP17612 351 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 SERPINA2P20848 420 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 HTR2CP28335 458 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 IL2RGP31785 369 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 GPR183P32249 361 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 SDC2P34741 201 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 PITPNBP48739 271 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 TMBIM6P55061 237 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 CAV3P56539 151 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 RBM11P57052 281 aaKnown RBP2.51□□□□□ -2.01
VPS13B-209ENST00000521559 OR10A3P58181 314 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 ERVK-16P61578 105 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 NCS1P62166 190 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 LSM3P62310 102 aaKnown RBP2.51□□□□□ -2.01
VPS13B-209ENST00000521559 MXD1Q05195 221 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 P2RY14Q15391 338 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 FAM189A2Q15884 450 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 DGUOKQ16854 277 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 MPV17LQ2QL34 196 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 TMEM249Q2WGJ8 235 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 SLC22A6Q4U2R8 563 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 LRRC10Q5BKY1 277 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 NHLRC3Q5JS37 347 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 SPIN3Q5JUX0 258 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 HES5Q5TA89 166 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 WDR25Q64LD2 544 aaPredicted RBP2.51□□□□□ -2.01
VPS13B-209ENST00000521559 CYB5R2Q6BCY4 276 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 Q6P435 159 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 DHRS11Q6UWP2 260 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 ZNF841Q6ZN19 808 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 OR2W3Q7Z3T1 314 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 COX8CQ7Z4L0 72 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 C5orf24Q7Z6I8 188 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 CLVS1Q8IUQ0 354 aaPredicted RBP2.51□□□□□ -2.01
VPS13B-209ENST00000521559 BATF2Q8N1L9 274 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 OSR2Q8N2R0 312 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 ZNF561Q8N587 486 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 CHST4Q8NCG5 386 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 OR51D1Q8NGF3 324 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 OR51T1Q8NGJ9 327 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 OR5D13Q8NGL4 314 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 OR10G7Q8NGN6 311 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 OR10K1Q8NGX5 313 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 KCNG3Q8TAE7 436 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 TOMM40LQ969M1 308 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 FAM3DQ96BQ1 224 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 C5orf30Q96GV9 206 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 C2orf48Q96LS8 159 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 C1orf147Q96MC9 270 aaPredicted RBP2.51□□□□□ -2.01
VPS13B-209ENST00000521559 GAFA1Q96PS6 74 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 BCL7BQ9BQE9 202 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 TM2D1Q9BX74 207 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 FAM192AQ9GZU8 254 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 NAA50Q9GZZ1 169 aaKnown RBP2.51□□□□□ -2.01
VPS13B-209ENST00000521559 CST11Q9H112 138 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 BANF2Q9H503 90 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 C5orf66Q9H5L9 145 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 NARFLQ9H6Q4 476 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 RNF167Q9H6Y7 350 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 PLGRKTQ9HBL7 147 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 NDUFA13Q9P0J0 144 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 ABRACLQ9P1F3 81 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 CTSZQ9UBR2 303 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 RAB22AQ9UL26 194 aa2.51□□□□□ -2.01
VPS13B-209ENST00000521559 MAB21L2Q9Y586 359 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms