RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 EDDM3AQ14507 147 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 TBPL2Q6SJ96 375 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 OSR2Q8N2R0 312 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 TMEM86BQ8N661 226 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 UBL4BQ8N7F7 174 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 LY6G5BQ8NDX9 201 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 SLC35B4Q969S0 331 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 MS4A6EQ96DS6 147 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 OR52E6Q96RD3 313 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 PECRQ9BY49 303 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 FKBP14Q9NWM8 211 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 RPUSD1Q9UJJ7 312 aaKnown RBP2.35□□□□□ -2.03
SQLE-204ENST00000520493 DNAJC12Q9UKB3 198 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 ARL2BPQ9Y2Y0 163 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 MRPS16Q9Y3D3 137 aaKnown RBP2.35□□□□□ -2.03
SQLE-204ENST00000520493 UBR4Q5T4S7 5183 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 PLCH2O75038 1416 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 BAZ1BQ9UIG0 1483 aaKnown RBP2.34□□□□□ -2.03
SQLE-204ENST00000520493 ATAD5Q96QE3 1844 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 ANKRD11Q6UB99 2663 aaPredicted RBP2.34□□□□□ -2.03
SQLE-204ENST00000520493 IGHV3OR16-8A0A075B7F1 116 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 TGIF2-C20orf24A0A0A6YYL0 155 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 SMIM9A6NGZ8 99 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 ZNF98A6NK75 572 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 A8MWP4 228 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 C16orf90A8MZG2 172 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 MRASO14807 208 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 HAND1O96004 215 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 CD34P28906 385 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 PPP1R2P41236 205 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 REG1BP48304 166 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 CTBP2P56545 445 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 JOSD1Q15040 202 aaPredicted RBP2.34□□□□□ -2.03
SQLE-204ENST00000520493 PLPPR5Q32ZL2 321 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 PPP1R2P3Q6NXS1 205 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 OR1L8Q8NGR8 309 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 DEDD2Q8WXF8 326 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 DIRAS2Q96HU8 199 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 TSSK6Q9BXA6 273 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 GABARAPL1Q9H0R8 117 aa2.34□□□□□ -2.03
SQLE-204ENST00000520493 ANKRD17O75179 2603 aaKnown RBP2.34□□□□□ -2.04
SQLE-204ENST00000520493 ZFHX4Q86UP3 3567 aa2.34□□□□□ -2.04
SQLE-204ENST00000520493 IGKV1-12A0A0C4DH73 117 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 ZNF729A6NN14 1252 aaPredicted RBP2.33□□□□□ -2.04
SQLE-204ENST00000520493 A8MUU9 505 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 C4orf51C9J302 202 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 K7EQS6 105 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 CHP2O43745 196 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 IGKV1D-33P01593 117 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 IGKV1-33P01594 117 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 IGKV1D-12P01611 117 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 IGHG2P01859 326 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 OPN1SWP03999 348 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 CD7P09564 240 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 CD79AP11912 226 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 CTLA4P16410 223 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 OR10J1P30954 320 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 GABRA3P34903 492 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 TGFBR2P37173 567 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 CA7P43166 264 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 AKR1C2P52895 323 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 FGF12P61328 243 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 VBP1P61758 197 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 IFITM2Q01629 132 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 PDGFRLQ15198 375 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 GUK1Q16774 197 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 ACOT6Q3I5F7 207 aaPredicted RBP2.33□□□□□ -2.04
SQLE-204ENST00000520493 TMEM97Q5BJF2 176 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 TMEM69Q5SWH9 247 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 C1orf194Q5T5A4 169 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 SBSNQ6UWP8 590 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 C5orf46Q6UWT4 87 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 Q6ZQT7 251 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 CCDC121Q6ZUS5 278 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 LRP11Q86VZ4 500 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 SGPP2Q8IWX5 399 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 DEFB125Q8N687 156 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 BPIFB6Q8NFQ5 453 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 OR5P3Q8WZ94 311 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 RBPMSQ93062 196 aaKnown RBP2.33□□□□□ -2.04
SQLE-204ENST00000520493 CPNE2Q96FN4 548 aaPredicted RBP2.33□□□□□ -2.04
SQLE-204ENST00000520493 KCNIP2Q9NS61 270 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 GLTPQ9NZD2 209 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 STOML2Q9UJZ1 356 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 FBXO5Q9UKT4 447 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 WASHC3Q9Y3C0 194 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 SAMHD1Q9Y3Z3 626 aaKnown RBP2.33□□□□□ -2.04
SQLE-204ENST00000520493 PHLDA3Q9Y5J5 127 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 ARL5AQ9Y689 179 aa2.33□□□□□ -2.04
SQLE-204ENST00000520493 THADAQ6YHU6 1953 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 IGLV2-18A0A075B6J9 118 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 TRBV24-1A0A075B6N3 115 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 IGKV1OR2-108A0A075B7D4 117 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 PQLC2LA1A4F0 135 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 LINC00862A6NCI5 91 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 M0R381 172 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 APOMO95445 188 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 SERPINA1P01009 418 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 TRGV3P03979 118 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 PRPS1L1P21108 318 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms