RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 SRMP19623 302 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 PSMB6P28072 239 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 CMPK1P30085 196 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 CD80P33681 288 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 DRD3P35462 400 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 RPL4P36578 427 aaKnown RBP2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 DLSTP36957 453 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 SSR2P43308 183 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 DHPSP49366 369 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 NDUFA6P56556 154 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 KLF3P57682 345 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 CARD18P57730 90 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR12D2P58182 307 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 TAS2R41P59536 307 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 RND3P61587 244 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 RPS21P63220 83 aaKnown RBP2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 EIF5AP63241 154 aaKnown RBP2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC35A1P78382 337 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 NTHL1P78549 312 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 FAM3AP98173 230 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 GTF3C1Q12789 2109 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 GGTLC2Q14390 218 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 HERPUD1Q15011 391 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR1Q1Q15612 314 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR7A5Q15622 319 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF141Q15928 474 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM241Q24JQ0 296 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 PGGHGQ32M88 737 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 MAJINQ3KP22 176 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 AKIRIN2Q53H80 203 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 ACTBL2Q562R1 376 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 FAM78AQ5JUQ0 283 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 C9orf129Q5T035 196 aaKnown RBP2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR8G2PQ6IF36 304 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2A2Q6IF42 318 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 MYO7BQ6PIF6 2116 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC25A26Q70HW3 274 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 MOB1BQ7L9L4 216 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 TCF24Q7RTU0 167 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 VN1R4Q7Z5H5 301 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM183AQ8IXX5 376 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 GCNT2Q8N0V5 402 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 CDRT4Q8N9R6 151 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM229BQ8NBD8 167 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 APCDD1LQ8NCL9 501 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 BHLHE23Q8NDY6 225 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM104Q8NE00 496 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 STEAP2Q8NFT2 490 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 TET1Q8NFU7 2136 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR7G2Q8NG99 324 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR4E2Q8NGC2 313 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR4K17Q8NGC6 315 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR10G4Q8NGN3 311 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR10R2Q8NGX6 335 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2T27Q8NH04 317 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2V1Q8NHB1 315 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 NEK7Q8TDX7 302 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 ORAOV1Q8WV07 137 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 MCHR2Q969V1 340 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 SMIM19Q96E16 107 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 SEH1LQ96EE3 360 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 PELI1Q96FA3 418 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC41A3Q96GZ6 507 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 AKR1E2Q96JD6 320 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 PACRGQ96M98 296 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 VSTM2LQ96N03 204 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 MCHR1Q99705 422 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 GABRG3Q99928 467 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF2Q9BSG1 426 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR8D2Q9GZM6 311 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 RAB33BQ9H082 229 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 SRMSQ9H3Y6 488 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF702PQ9H963 129 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 TREM1Q9NP99 234 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC17A5Q9NRA2 495 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 PNO1Q9NRX1 252 aaKnown RBP2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 C1orf123Q9NWV4 160 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 TAS2R8Q9NYW2 309 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 CHRNA9Q9UGM1 479 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 SHPKQ9UHJ6 478 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 PITPNC1Q9UKF7 332 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR52A1Q9UKL2 312 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 ANAPC10Q9UM13 185 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 SIGLEC7Q9Y286 467 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF443Q9Y2A4 671 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 RHBDD3Q9Y3P4 386 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 LTBP2Q14767 1821 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 OBSL1O75147 1896 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 GOLGA4Q13439 2230 aaKnown RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 A0A0B4J2E0 115 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 IGHV2-70DA0A0C4DH43 119 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 A0A1B0GX12 115 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 DAPL1A0PJW8 107 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 A6NIZ1 184 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 LRRC30A6NM36 301 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 K7EQS6 105 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 CDC42EP2O14613 210 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 CDX4O14627 284 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 TAAR5O14804 337 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF264O43296 627 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms