RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 SIP14410 1827 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 MYO5BQ9ULV0 1848 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 NBASA2RRP1 2371 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 TTC21AQ8NDW8 1320 aa-3.41□□□□□ -2.95
RNU6-539P-201ENST00000516665 A0A087WTM6 91 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 A0A0J9YW62 118 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 GOLGA8JA6NMD2 632 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 CD14P08571 375 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 GOLGA8HP0CJ92 632 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 RFC3P40938 356 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 MIAQ16674 131 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 C9orf64Q5T6V5 341 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 EBLN2Q6P2I7 272 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 TTC23LQ6PF05 361 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 FAM19A3Q7Z5A8 133 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 VTCN1Q7Z7D3 282 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 ELMOD2Q8IZ81 293 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 OR5K2Q8NHB8 316 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 C22orf15Q8WYQ4 148 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 CCL17Q92583 94 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 METTL26Q96S19 204 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 TMED9Q9BVK6 235 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 OR51B5Q9H339 312 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 CHRNA9Q9UGM1 479 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 FIS1Q9Y3D6 152 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 DNAH9Q9NYC9 4486 aa-3.41□□□□□ -2.96
RNU6-539P-201ENST00000516665 A0A0B4J2E0 115 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 CREBL2O60519 120 aaPredicted RBP-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 OR5F1O95221 314 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 HBE1P02100 147 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 CATP04040 527 aaKnown RBP-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 GBX2P52951 348 aaPredicted RBP-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 FGF12P61328 243 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 NDUFA5Q16718 116 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 SPATA45Q537H7 98 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 TMEM31Q5JXX7 168 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 APRG1Q8IVJ8 170 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 NKAIN3Q8N8D7 197 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 INO80EQ8NBZ0 244 aaPredicted RBP-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 OR1L4Q8NGR5 311 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 CAPSLQ8WWF8 208 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 RAB1CQ92928 201 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 FMC1Q96HJ9 113 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 RMND5AQ9H871 391 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 CLN6Q9NWW5 311 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 NAT8Q9UHE5 227 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 TBC1D24Q9ULP9 559 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 PIK3R4Q99570 1358 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 ITPR1Q14643 2758 aa-3.42□□□□□ -2.96
RNU6-539P-201ENST00000516665 TRBV10-2A0A0K0K1G8 114 aa-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 TMEM250H0YL14 139 aa-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 TTC4O95801 387 aa-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 CA2P00918 260 aa-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 ANXA5P08758 320 aa-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 KCNJ3P48549 501 aa-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 BPIFB3P59826 476 aa-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 SLC35A1P78382 337 aa-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 WDR82Q6UXN9 313 aa-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 OR8G5Q8NG78 346 aa-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 SFT2D1Q8WV19 159 aa-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 PTP4A1Q93096 173 aa-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 PARD6GQ9BYG4 376 aaPredicted RBP-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 HHLA2Q9UM44 414 aa-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 COQ4Q9Y3A0 265 aa-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 DICER1Q9UPY3 1922 aaKnown RBP-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 PLCE1Q9P212 2302 aa-3.43□□□□□ -2.96
RNU6-539P-201ENST00000516665 MAPK13O15264 365 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 LYZL6O75951 148 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 OR2F2O95006 317 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 METTL15P1P0C7V9 234 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 FKBP2P26885 142 aaKnown RBP-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 CD82P27701 267 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 ARF5P84085 180 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 BNIP2Q12982 314 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 GAMTQ14353 236 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 ETFRF1Q6IPR1 90 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 AMTNQ6UX39 209 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 ZNF826PQ6ZT77 177 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 FADS6Q8N9I5 356 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 GDAP1Q8TB36 358 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 TMEM106AQ96A25 262 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 RPRD1AQ96P16 312 aaPredicted RBP-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 OR7D2Q96RA2 312 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 CALN1Q9BXU9 219 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 BEX1Q9HBH7 125 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 CCDC88AQ3V6T2 1871 aa-3.44□□□□□ -2.96
RNU6-539P-201ENST00000516665 TRAV8-3A0A0A6YYJ7 113 aa-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 IGHV2-26A0A0B4J1V2 119 aa-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 DPRXA6NFQ7 191 aa-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 H3BP45 60 aa-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 SIRPB1O00241 398 aa-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 UBE2L6O14933 153 aa-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 NDUFB2O95178 105 aa-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 CLPSP04118 112 aa-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 CCDC192P0DO97 292 aa-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 STC1P52823 247 aa-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 CDNFQ49AH0 187 aa-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 PHF13Q86YI8 300 aaPredicted RBP-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 KIFAP3Q92845 792 aa-3.45□□□□□ -2.96
RNU6-539P-201ENST00000516665 EBNA1BP2Q99848 306 aaKnown RBP-3.45□□□□□ -2.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms