RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 MKS1Q9NXB0 559 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 ACTR10Q9NZ32 417 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 C9orf78Q9NZ63 289 aaPredicted RBP-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 MAT2BQ9NZL9 334 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 LARSQ9P2J5 1176 aaKnown RBP-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 XCL2Q9UBD3 114 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 ORC3Q9UBD5 711 aaPredicted RBP-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 AASSQ9UDR5 926 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 PCTPQ9UKL6 214 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 POFUT2Q9Y2G5 429 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 KCNIP3Q9Y2W7 256 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 UBE2J1Q9Y385 318 aaPredicted RBP-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 PHLDA3Q9Y5J5 127 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 TIMM9Q9Y5J7 89 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 SNX8Q9Y5X2 465 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 CFAP20Q9Y6A4 193 aaKnown RBP-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 NPHP3Q7Z494 1330 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 DSPPQ9NZW4 1301 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 RTL9Q8NET4 1388 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 MYOM3Q5VTT5 1437 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 YTHDC2Q9H6S0 1430 aaKnown RBP-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 POLA1P09884 1462 aaPredicted RBP-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 NRXN1Q9ULB1 1477 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 RIMBP3CA6NJZ7 1639 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 RIMBP3BA6NNM3 1639 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 RIMBP3Q9UFD9 1639 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 KIF1AQ12756 1690 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 RGPD3A6NKT7 1758 aaPredicted RBP-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 RGPD4Q7Z3J3 1758 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 PARP14Q460N5 1801 aa-1.01□□□□□ -2.57
SCARNA20.2-201ENST00000516052 TRAV38-1A0A0B4J264 116 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 A0A0J9YY99 117 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 TRBV7-4A0A0J9YYF1 115 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 FAM237AA0A1B0GTK4 181 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 A0A1W2PQH9 124 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 A0A1W2PR77 199 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 DAPL1A0PJW8 107 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 HYKKA2RU49 373 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 OR6C6A6NF89 314 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 LRRC72A6NJI9 287 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 OR5K4A6NMS3 321 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 MEI4A8MW99 385 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 CENPBD1B2RD01 187 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 C17orf105B2RV13 164 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 H0YCG3 227 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 H3BT86 120 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 H7C4K7 107 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 M0QY20 66 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 DDX39AO00148 427 aaKnown RBP-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 O00370 1275 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 AQP7O14520 342 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 SDHDO14521 159 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 GABRDO14764 452 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 SLC30A4O14863 429 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 ARPC2O15144 300 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 ARPC5O15511 151 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 CHMP2AO43633 222 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 NDUFC1O43677 76 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 ASNA1O43681 348 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 SNX2O60749 519 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 EIF5BO60841 1220 aaKnown RBP-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 CTNSO60931 367 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 GGCTO75223 188 aaKnown RBP-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 SKAP2O75563 359 aaPredicted RBP-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 ANXA9O76027 345 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 CEP152O94986 1710 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 NDUFA3O95167 84 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 SNX4O95219 450 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 GADD45GO95257 159 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 LYPLA2O95372 231 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 PLEKHA8P1O95397 391 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 NSA2O95478 260 aaKnown RBP-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 YEATS4O95619 227 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 RAB3DO95716 219 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 GH1P01241 217 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 IFNA5P01569 189 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 EPOP01588 193 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 IGHV3-30P01768 117 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 HLA-AP01891 365 aaKnown RBP-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 MT-ND5P03915 603 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 GAPDHP04406 335 aaKnown RBP-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 PYGLP06737 847 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 OR52Z1P0C646 297 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 METTL15P1P0C7V9 234 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 SULT1A3P0DMM9 295 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 SULT1A4P0DMN0 295 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 IGHV3-30-5P0DP03 117 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 PYYP10082 97 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 SCGB1A1P11684 91 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 COX4I1P13073 169 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 SPI1P17947 270 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 BTF3P20290 206 aaKnown RBP-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 SERPINA2P20848 420 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 AKAP5P24588 427 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 CD24P25063 80 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 PSMB6P28072 239 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 GSTM2P28161 218 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 TEAD1P28347 426 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 CD52P31358 61 aa-1.02□□□□□ -2.57
SCARNA20.2-201ENST00000516052 AKT2P31751 481 aa-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms