RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-215ENST00000515479 MRPS24Q96EL2 167 aaKnown RBP3.33□□□□□ -1.88
RUFY3-215ENST00000515479 ADAT3Q96EY9 351 aaPredicted RBP3.33□□□□□ -1.88
RUFY3-215ENST00000515479 FAM71F1Q96KD3 344 aaPredicted RBP3.33□□□□□ -1.88
RUFY3-215ENST00000515479 IMMP1LQ96LU5 166 aa3.33□□□□□ -1.88
RUFY3-215ENST00000515479 OXGR1Q96P68 337 aa3.33□□□□□ -1.88
RUFY3-215ENST00000515479 GINS4Q9BRT9 223 aa3.33□□□□□ -1.88
RUFY3-215ENST00000515479 PBOV1Q9GZY1 135 aa3.33□□□□□ -1.88
RUFY3-215ENST00000515479 OR10A4Q9H209 315 aa3.33□□□□□ -1.88
RUFY3-215ENST00000515479 METTL7AQ9H8H3 244 aa3.33□□□□□ -1.88
RUFY3-215ENST00000515479 RNF122Q9H9V4 155 aa3.33□□□□□ -1.88
RUFY3-215ENST00000515479 BEX1Q9HBH7 125 aa3.33□□□□□ -1.88
RUFY3-215ENST00000515479 NOX3Q9HBY0 568 aa3.33□□□□□ -1.88
RUFY3-215ENST00000515479 PROK2Q9HC23 129 aa3.33□□□□□ -1.88
RUFY3-215ENST00000515479 NIT2Q9NQR4 276 aa3.33□□□□□ -1.88
RUFY3-215ENST00000515479 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.33□□□□□ -1.88
RUFY3-215ENST00000515479 METTL1Q9UBP6 276 aaKnown RBP3.33□□□□□ -1.88
RUFY3-215ENST00000515479 B4GALT7Q9UBV7 327 aa3.33□□□□□ -1.88
RUFY3-215ENST00000515479 MIOXQ9UGB7 285 aa3.33□□□□□ -1.88
RUFY3-215ENST00000515479 HDGFL3Q9Y3E1 203 aa3.33□□□□□ -1.88
RUFY3-215ENST00000515479 RAI1Q7Z5J4 1906 aaPredicted RBP3.32□□□□□ -1.88
RUFY3-215ENST00000515479 KIAA2026Q5HYC2 2103 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 HEATR1Q9H583 2144 aaKnown RBP3.32□□□□□ -1.88
RUFY3-215ENST00000515479 USF3Q68DE3 2245 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 VPS13CQ709C8 3753 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 TRAV18A0A075B6X5 111 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 TRAV14DV4A0A0A6YYC5 116 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 A0A0A6YYD4 124 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 TMEM235A6NFC5 223 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 CEACAM18A8MTB9 384 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 F5H5P2 479 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 MFNGO00587 321 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 TOXO94900 526 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 RLN2P04090 185 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 CD3DP04234 171 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 SERPINA5P05154 406 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 SERPINA7P05543 415 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 FCER2P06734 321 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 H2BFMP0C1H6 154 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 CCL3P10147 92 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 NR2C1P13056 603 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 ZNF35P13682 527 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 GTF2F2P13984 249 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 RPA2P15927 270 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 TBPP20226 339 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 CRYGSP22914 178 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 FKBP2P26885 142 aaKnown RBP3.32□□□□□ -1.88
RUFY3-215ENST00000515479 PRSS3P35030 304 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 ALDH3B1P43353 468 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 DNASE1L1P49184 302 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 CX3CR1P49238 355 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 ZNF121P58317 390 aaPredicted RBP3.32□□□□□ -1.88
RUFY3-215ENST00000515479 GRB2P62993 217 aaKnown RBP3.32□□□□□ -1.88
RUFY3-215ENST00000515479 SLC35A1P78382 337 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 DEFA6Q01524 100 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 TFF3Q07654 80 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 ENDOGQ14249 297 aaKnown RBP3.32□□□□□ -1.88
RUFY3-215ENST00000515479 ZNF345Q14585 488 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 MEF2DQ14814 521 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 AVPI1Q5T686 147 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 OR4A47Q6IF82 309 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 RAB12Q6IQ22 244 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 LPCAT3Q6P1A2 487 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 ATRAIDQ6UW56 229 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 C17orf107Q6ZR85 190 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 TMEM17Q86X19 198 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 DOLPP1Q86YN1 238 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 PDZD9Q8IXQ8 264 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 KDM8Q8N371 416 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 SLC22A24Q8N4F4 322 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 ZDHHC22Q8N966 263 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 KLHL30-AS1Q8NEE0 82 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 OR4K17Q8NGC6 315 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 OR5M9Q8NGP3 310 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 OR5M1Q8NGP8 315 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 RNASE11Q8TAA1 199 aaKnown RBP3.32□□□□□ -1.88
RUFY3-215ENST00000515479 PAQR8Q8TEZ7 354 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 TMEM54Q969K7 222 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 NARS2Q96I59 477 aaKnown RBP3.32□□□□□ -1.88
RUFY3-215ENST00000515479 SLC25A21Q9BQT8 299 aaPredicted RBP3.32□□□□□ -1.88
RUFY3-215ENST00000515479 C2orf88Q9BSF0 95 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 EMC6Q9BV81 110 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 ANGPTL4Q9BY76 406 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 PRRG4Q9BZD6 226 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 NKX6-2Q9C056 277 aaPredicted RBP3.32□□□□□ -1.88
RUFY3-215ENST00000515479 ATG5Q9H1Y0 275 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 LIME1Q9H400 295 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 TMEM185BQ9H7F4 350 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 ZNF160Q9HCG1 818 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 TMEM138Q9NPI0 162 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 C19orf12Q9NSK7 152 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 VSIG4Q9Y279 399 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 PKD1L1Q8TDX9 2849 aa3.32□□□□□ -1.88
RUFY3-215ENST00000515479 PRR14LQ5THK1 2151 aa3.31□□□□□ -1.88
RUFY3-215ENST00000515479 TET2Q6N021 2002 aaPredicted RBP3.31□□□□□ -1.88
RUFY3-215ENST00000515479 IGKV1-9A0A0C4DH69 117 aa3.31□□□□□ -1.88
RUFY3-215ENST00000515479 A0A0G2JMM0 328 aa3.31□□□□□ -1.88
RUFY3-215ENST00000515479 A0A0U1RQV5 110 aa3.31□□□□□ -1.88
RUFY3-215ENST00000515479 A0A1W2PPB8 328 aa3.31□□□□□ -1.88
RUFY3-215ENST00000515479 A0A1W2PRS3 328 aa3.31□□□□□ -1.88
RUFY3-215ENST00000515479 C5orf63A6NC05 138 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms