RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 AGMATQ9BSE5 352 aa16.17■□□□□ 0.18
SSBP2-218ENST00000514493 ABHD14AQ9BUJ0 271 aa16.17■□□□□ 0.18
SSBP2-218ENST00000514493 LIN7CQ9NUP9 197 aaKnown RBP16.17■□□□□ 0.18
SSBP2-218ENST00000514493 RNF150Q9ULK6 438 aa16.17■□□□□ 0.18
SSBP2-218ENST00000514493 PSG11Q9UQ72 335 aa16.17■□□□□ 0.18
SSBP2-218ENST00000514493 HSPB11Q9Y547 144 aa16.17■□□□□ 0.18
SSBP2-218ENST00000514493 TRAV14DV4A0A0A6YYC5 116 aa16.16■□□□□ 0.18
SSBP2-218ENST00000514493 RNF212BA8MTL3 300 aa16.16■□□□□ 0.18
SSBP2-218ENST00000514493 ST8SIA5O15466 376 aa16.16■□□□□ 0.18
SSBP2-218ENST00000514493 TMEM268Q5VZI3 342 aa16.16■□□□□ 0.18
SSBP2-218ENST00000514493 LRRC75A-AS1Q8N1F1 130 aa16.16■□□□□ 0.18
SSBP2-218ENST00000514493 C11orf42Q8N5U0 333 aa16.16■□□□□ 0.18
SSBP2-218ENST00000514493 ZNF439Q8NDP4 499 aa16.16■□□□□ 0.18
SSBP2-218ENST00000514493 LEAP2Q969E1 77 aa16.16■□□□□ 0.18
SSBP2-218ENST00000514493 PLSCR3Q9NRY6 295 aa16.16■□□□□ 0.18
SSBP2-218ENST00000514493 BOLA1Q9Y3E2 137 aa16.16■□□□□ 0.18
SSBP2-218ENST00000514493 PIGBOS1A0A0B4J2F0 54 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 IGHV4-61A0A0C4DH41 118 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 CDS2O95674 445 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 IGHV1-8P0DP01 117 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 RAB7AP51149 207 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 ERVFRD-1P60508 538 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 Q3ZCU0 254 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 LYZL2Q7Z4W2 148 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 SLC35G3Q8N808 338 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 IL22RA2Q969J5 263 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 MBD6Q96DN6 1003 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 IFI27L2Q9H2X8 130 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 TMED3Q9Y3Q3 217 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 FXYD6-FXYD2A0A087WZ82 144 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 DUXBA0A1W2PPF3 345 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 HMSDA8MTL9 139 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 SLC31A2O15432 143 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 IGHV3-7P01780 117 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 ZFP36P26651 326 aaKnown RBP16.15■□□□□ 0.18
SSBP2-218ENST00000514493 ZNF134P52741 427 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 CLEC12BQ2HXU8 276 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 IAH1Q2TAA2 248 aaPredicted RBP16.15■□□□□ 0.18
SSBP2-218ENST00000514493 LRRC37A5PQ49AS3 106 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 ZNF695Q8IW36 515 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 C5orf30Q96GV9 206 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 SESN1Q9Y6P5 492 aa16.15■□□□□ 0.18
SSBP2-218ENST00000514493 PDZD2O15018 2839 aa16.14■□□□□ 0.17
SSBP2-218ENST00000514493 A0A087X0M5 115 aa16.14■□□□□ 0.17
SSBP2-218ENST00000514493 A0A1B0GX30 115 aa16.14■□□□□ 0.17
SSBP2-218ENST00000514493 EIF4EBP1Q13541 118 aaPredicted RBP16.14■□□□□ 0.17
SSBP2-218ENST00000514493 CT45A1Q5HYN5 189 aa16.14■□□□□ 0.17
SSBP2-218ENST00000514493 CT45A3Q8NHU0 189 aa16.14■□□□□ 0.17
SSBP2-218ENST00000514493 RBPMSQ93062 196 aaKnown RBP16.14■□□□□ 0.17
SSBP2-218ENST00000514493 ABHD14BQ96IU4 210 aa16.14■□□□□ 0.17
SSBP2-218ENST00000514493 ENSAO43768 121 aaKnown RBP16.13■□□□□ 0.17
SSBP2-218ENST00000514493 SNAPC5O75971 98 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 SERPINE2P07093 398 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 SLC25A16P16260 332 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 PSMB6P28072 239 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 C11orf87Q6NUJ2 197 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 SLC25A48Q6ZT89 311 aaKnown RBP16.13■□□□□ 0.17
SSBP2-218ENST00000514493 SELENOHQ8IZQ5 122 aaKnown RBP16.13■□□□□ 0.17
SSBP2-218ENST00000514493 SDHAF2Q9NX18 166 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 ONECUT1Q9UBC0 465 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 hCG_1809904A0A1W2PP81 198 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 A0A1W2PPE2 198 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 A0A1W2PR64 198 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 A0A1W2PRV1 198 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 MPC2O95563 127 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 SLC25A4P12235 298 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 GPR12P47775 334 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 GNG10P50151 68 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 CATR1Q13166 79 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 IL15RAQ13261 267 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 LGALSLQ3ZCW2 172 aaPredicted RBP16.13■□□□□ 0.17
SSBP2-218ENST00000514493 ZNF66Q6ZN08 573 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 C8orf31Q8N9H6 132 aa16.13■□□□□ 0.17
SSBP2-218ENST00000514493 M0R1W7 72 aa16.12■□□□□ 0.17
SSBP2-218ENST00000514493 ARPC5O15511 151 aa16.12■□□□□ 0.17
SSBP2-218ENST00000514493 FOXH1O75593 365 aa16.12■□□□□ 0.17
SSBP2-218ENST00000514493 LCN2P80188 198 aa16.12■□□□□ 0.17
SSBP2-218ENST00000514493 PAX2Q02962 417 aa16.12■□□□□ 0.17
SSBP2-218ENST00000514493 KIR3DL3Q8N743 410 aa16.12■□□□□ 0.17
SSBP2-218ENST00000514493 HSD17B10Q99714 261 aaKnown RBP16.12■□□□□ 0.17
SSBP2-218ENST00000514493 TMEM133Q9H2Q1 129 aa16.12■□□□□ 0.17
SSBP2-218ENST00000514493 GSKIPQ9P0R6 139 aa16.12■□□□□ 0.17
SSBP2-218ENST00000514493 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.11■□□□□ 0.17
SSBP2-218ENST00000514493 VPS13CQ709C8 3753 aa16.11■□□□□ 0.17
SSBP2-218ENST00000514493 IGHV2-70DA0A0C4DH43 119 aa16.11■□□□□ 0.17
SSBP2-218ENST00000514493 A0A1W2PPE3 182 aa16.11■□□□□ 0.17
SSBP2-218ENST00000514493 ZNF16P17020 682 aaPredicted RBP16.11■□□□□ 0.17
SSBP2-218ENST00000514493 VDAC1P21796 283 aa16.11■□□□□ 0.17
SSBP2-218ENST00000514493 TMEM65Q6PI78 240 aa16.11■□□□□ 0.17
SSBP2-218ENST00000514493 ZBTB8BQ8NAP8 495 aaPredicted RBP16.11■□□□□ 0.17
SSBP2-218ENST00000514493 THAP6Q8TBB0 222 aa16.11■□□□□ 0.17
SSBP2-218ENST00000514493 ZNF596Q8TC21 504 aa16.11■□□□□ 0.17
SSBP2-218ENST00000514493 POLR3KQ9Y2Y1 108 aaPredicted RBP16.11■□□□□ 0.17
SSBP2-218ENST00000514493 FAM157AC9JC47 383 aa16.1■□□□□ 0.17
SSBP2-218ENST00000514493 PET100P0DJ07 73 aa16.1■□□□□ 0.17
SSBP2-218ENST00000514493 BTNL3Q6UXE8 466 aa16.1■□□□□ 0.17
SSBP2-218ENST00000514493 LINC00311Q8N616 119 aa16.1■□□□□ 0.17
SSBP2-218ENST00000514493 TCTEX1D1Q8N7M0 179 aa16.1■□□□□ 0.17
SSBP2-218ENST00000514493 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.1■□□□□ 0.17
SSBP2-218ENST00000514493 GAB2Q9UQC2 676 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms