RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 RBFOX1Q9NWB1 397 aaKnown RBP8.07□□□□□ -1.12
USP53-207ENST00000510852 DOK5Q9P104 306 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 CACNA1GO43497 2377 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 ZNF816-ZNF321PA0A0X1KG74 233 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 LOC100130705A0A1B0GUX0 176 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 ZC3H12DA2A288 527 aaKnown RBP8.07□□□□□ -1.12
USP53-207ENST00000510852 MLNRO43193 412 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 TACSTD2P09758 323 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 SULT1A3P0DMM9 295 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 SULT1A4P0DMN0 295 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 AMTP48728 403 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 HCCSP53701 268 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 CTBP2P56545 445 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 HIST1H1AQ02539 215 aaPredicted RBP8.07□□□□□ -1.12
USP53-207ENST00000510852 HIST3H3Q16695 136 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 PHLDA2Q53GA4 152 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 HBMQ6B0K9 141 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 Q6ZS92 163 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 C11orf45Q8TAV5 145 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 SMIM3Q9BZL3 60 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 Q9UF83 564 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 DSPP15924 2871 aaKnown RBP8.07□□□□□ -1.12
USP53-207ENST00000510852 OR2M5A3KFT3 312 aa8.06□□□□□ -1.12
USP53-207ENST00000510852 A8MVM7 634 aa8.06□□□□□ -1.12
USP53-207ENST00000510852 PSPNO60542 156 aa8.06□□□□□ -1.12
USP53-207ENST00000510852 GCGP01275 180 aa8.06□□□□□ -1.12
USP53-207ENST00000510852 MNDAP41218 407 aa8.06□□□□□ -1.12
USP53-207ENST00000510852 B3GALT5-AS1P59052 145 aa8.06□□□□□ -1.12
USP53-207ENST00000510852 TGFBR3Q03167 851 aa8.06□□□□□ -1.12
USP53-207ENST00000510852 LINC00303Q3SY05 128 aa8.06□□□□□ -1.12
USP53-207ENST00000510852 C1QL3Q5VWW1 255 aa8.06□□□□□ -1.12
USP53-207ENST00000510852 MMD2Q8IY49 270 aa8.06□□□□□ -1.12
USP53-207ENST00000510852 DCUN1D4Q92564 292 aa8.06□□□□□ -1.12
USP53-207ENST00000510852 RASL10AQ92737 203 aa8.06□□□□□ -1.12
USP53-207ENST00000510852 REG4Q9BYZ8 158 aa8.06□□□□□ -1.12
USP53-207ENST00000510852 ZNF696Q9H7X3 374 aa8.06□□□□□ -1.12
USP53-207ENST00000510852 ORC6Q9Y5N6 252 aa8.06□□□□□ -1.12
USP53-207ENST00000510852 DAPL1A0PJW8 107 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 CLDN25C9JDP6 229 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 CDC42EP2O14613 210 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 NPIPB7O75200 414 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 H2BFMP0C1H6 154 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 IGFBP3P17936 291 aaPredicted RBP8.05□□□□□ -1.12
USP53-207ENST00000510852 CD34P28906 385 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 STPG3Q8N7X2 389 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 DNAJA3Q96EY1 480 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 SLC25A39Q9BZJ4 359 aaPredicted RBP8.05□□□□□ -1.12
USP53-207ENST00000510852 ZDHHC11Q9H8X9 412 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 AURKAIP1Q9NWT8 199 aaPredicted RBP8.05□□□□□ -1.12
USP53-207ENST00000510852 ST3GAL6Q9Y274 331 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 SPIN1Q9Y657 262 aaPredicted RBP8.05□□□□□ -1.12
USP53-207ENST00000510852 TRAV36DV7A0A075B6V5 113 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 TMEM189A5PLL7 270 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 CEACAM18A8MTB9 384 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 HBE1P02100 147 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 REG1AP05451 166 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 ELANEP08246 267 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 SELEP16581 610 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 USF1P22415 310 aaPredicted RBP8.05□□□□□ -1.12
USP53-207ENST00000510852 POLR2IP36954 125 aaKnown RBP8.05□□□□□ -1.12
USP53-207ENST00000510852 NHLRC3Q5JS37 347 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 C1orf140Q5VVS0 124 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 PNKDQ8N490 385 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 OR8G5Q8NG78 346 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 OR52L1Q8NGH7 329 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 ZNRF2Q8NHG8 242 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 FGGYQ96C11 551 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 DDIT4LQ96D03 193 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 RDH12Q96NR8 316 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 CLCC1Q96S66 551 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 ZNF71Q9NQZ8 489 aaPredicted RBP8.05□□□□□ -1.12
USP53-207ENST00000510852 MRPL16Q9NX20 251 aaKnown RBP8.05□□□□□ -1.12
USP53-207ENST00000510852 TAS2R16Q9NYV7 291 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 LAMTOR2Q9Y2Q5 125 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 V9GYS6 101 aa8.05□□□□□ -1.12
USP53-207ENST00000510852 TNRC6AQ8NDV7 1962 aaKnown RBP8.05□□□□□ -1.12
USP53-207ENST00000510852 UNC119BA6NIH7 251 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 SOX14O95416 240 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 TFPIP10646 304 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 SHC1P29353 583 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 CHRNB4P30926 498 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 HRH1P35367 487 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 LTBQ06643 244 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 GABARAPL3Q9BY60 117 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 TMEM126AQ9H061 195 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 MED29Q9NX70 200 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 PKIGQ9Y2B9 76 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 TRAV39A0A0B4J263 110 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 A0A0G2JK05 382 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 BGLAPP02818 100 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 FKBP2P26885 142 aaKnown RBP8.04□□□□□ -1.12
USP53-207ENST00000510852 SFTPDP35247 375 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 GABRA2P47869 451 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 GNG5P63218 68 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 KIR3DS1Q14943 382 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 C6orf52Q5T4I8 152 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 OR10K2Q6IF99 312 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 ARL9Q6T311 187 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 FAM231DQ6ZW35 169 aa8.04□□□□□ -1.12
USP53-207ENST00000510852 SCCPDHQ8NBX0 429 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms