RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 ARPC4P59998 168 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 FGF12P61328 243 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 SNRPD2P62316 118 aaKnown RBP5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 EIF5AP63241 154 aaKnown RBP5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 SRPXP78539 464 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 IL24Q13007 206 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 EXOSC2Q13868 293 aaKnown RBP5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 TBC1D28Q2M2D7 210 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 AADACL3Q5VUY0 350 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 SHEQ5VZ18 495 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 PLCXD3Q63HM9 321 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 ZNF660Q6AZW8 331 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 OR52W1Q6IF63 320 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 TMUB2Q71RG4 321 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 TMED4Q7Z7H5 227 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 SLC7A5P1Q8MH63 180 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 Q8NBF4 154 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 OR2AE1Q8NHA4 323 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 C11orf45Q8TAV5 145 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 CITED2Q99967 270 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 CMSS1Q9BQ75 279 aaKnown RBP5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 PYGO2Q9BRQ0 406 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 SUCNR1Q9BXA5 334 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 HES7Q9BYE0 225 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 MFFQ9GZY8 342 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 DNTTIP1Q9H147 329 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 C5orf66Q9H5L9 145 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 CALHM2Q9HA72 323 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 C12orf4Q9NQ89 552 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 C1orf123Q9NWV4 160 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 EHFQ9NZC4 300 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 ANXA10Q9UJ72 324 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 TNFSF18Q9UNG2 199 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 KCNIP3Q9Y2W7 256 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 BDP1A6H8Y1 2624 aa5.52□□□□□ -1.53
TRAPPC11-206ENST00000509857 MED12LQ86YW9 2145 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 FXYD6-FXYD2A0A087WZ82 144 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 KIR2DS1A0A191URI9 304 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 DUXBA0A1W2PPF3 345 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 FAM230AA0A1W2PPH8 454 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 C5orf49A4QMS7 147 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 LRP5LA4QPB2 252 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 RNF222A6NCQ9 220 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 ANKRD30BLA7E2S9 258 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 CD300LBA8K4G0 201 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 K7EQD1 137 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 SAP30O75446 220 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 PMP2P02689 132 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 FCGR3AP08637 254 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 RRASP10301 218 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 RPS2P15880 293 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 COX5AP20674 150 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 PSMB6P28072 239 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 MDH2P40926 338 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 GLP1RP43220 463 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 KIR2DS4P43632 304 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 RND3P61587 244 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 LMO4P61968 165 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 GNG3P63215 75 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 SRYQ05066 204 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 PRDX4Q13162 271 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 KIR2DS1Q14954 304 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 TGIF1Q15583 401 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 GABRA6Q16445 453 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 BTNL8Q6UX41 500 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 TFAP2EQ6VUC0 442 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 Q6ZT83 130 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 KCTD9Q7L273 389 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 MOB1BQ7L9L4 216 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 SSX8Q7RTT4 187 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 ZNF546Q86UE3 836 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 SGPP2Q8IWX5 399 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 OR8H3Q8N146 312 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 EIF4E3Q8N5X7 224 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 CCDC71LQ8N9Z2 235 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 SPERTQ8NA61 448 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 INO80EQ8NBZ0 244 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 DEFB124Q8NES8 71 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 OR56B2PQ8NGI1 322 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 OR5M9Q8NGP3 310 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 OR13G1Q8NGZ3 307 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 OR51F2Q8NH61 342 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 STOML3Q8TAV4 291 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 MARCH1Q8TCQ1 289 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 FAM222BQ8WU58 562 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 PPP1R1CQ8WVI7 109 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 PIGCQ92535 297 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 ZNF75AQ96N20 296 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 RTBDNQ9BSG5 229 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 PDCD10Q9BUL8 212 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 PAPOLGQ9BWT3 736 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 CHIAQ9BZP6 476 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 ARL6Q9H0F7 186 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 FXYD6Q9H0Q3 95 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 ELL3Q9HB65 397 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 MYEF2Q9P2K5 600 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 ST3GAL6Q9Y274 331 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 POLDIP2Q9Y2S7 368 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 PTPRBP23467 1997 aa5.51□□□□□ -1.53
TRAPPC11-206ENST00000509857 SHANK1Q9Y566 2161 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms