RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 MEIG1Q5JSS6 88 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 DCAF12Q5T6F0 453 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 TCTN3Q6NUS6 607 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 OTOSQ8NHW6 89 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 PAXXQ9BUH6 204 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 GTSF1LQ9H1H1 148 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 LHX9Q9NQ69 397 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 STARD5Q9NSY2 213 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 TAAR3PQ9P1P4 343 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 TBC1D29Q9UFV1 150 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 TRGV10A0A0A0MS01 117 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 FAM240AA0A1B0GVK7 77 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 PRSS37A4D1T9 235 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 C9orf172C9J069 976 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 NDUFB3O43676 98 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 GPX1P07203 203 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 SRP19P09132 144 aaKnown RBP3.11□□□□□ -1.91
USP53-205ENST00000509769 MPZP25189 248 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 SPINT3P49223 89 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 UCP2P55851 309 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 POU3F1Q03052 451 aaPredicted RBP3.11□□□□□ -1.91
USP53-205ENST00000509769 C2orf68Q2NKX9 166 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 SLC10A6Q3KNW5 377 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 KIAA1644Q3SXP7 199 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 AAED1Q7RTV5 226 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 CENPVQ7Z7K6 275 aaPredicted RBP3.11□□□□□ -1.91
USP53-205ENST00000509769 CIARTQ8N365 385 aaPredicted RBP3.11□□□□□ -1.91
USP53-205ENST00000509769 OR11H4Q8NGC9 324 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 FBLIM1Q8WUP2 373 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 APOBEC3DQ96AK3 386 aaPredicted RBP3.11□□□□□ -1.91
USP53-205ENST00000509769 HDGFL3Q9Y3E1 203 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 TNFRSF18Q9Y5U5 241 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 MPC1Q9Y5U8 109 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 SIRT4Q9Y6E7 314 aaPredicted RBP3.11□□□□□ -1.91
USP53-205ENST00000509769 TAF1P21675 1872 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 FOXI3A8MTJ6 420 aaPredicted RBP3.11□□□□□ -1.91
USP53-205ENST00000509769 F5H697 171 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 F8VVB4 439 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 F8VWA3 439 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 IFNL4K9M1U5 179 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 NRG2O14511 850 aaPredicted RBP3.11□□□□□ -1.91
USP53-205ENST00000509769 NDUFC1O43677 76 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 C1QL1O75973 258 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 COX5BP10606 129 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 COL10A1Q03692 680 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 ZP4Q12836 540 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 C1orf140Q5VVS0 124 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 TEX38Q6PEX7 206 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 SLC23A3Q6PIS1 610 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 C2orf82Q6UX34 121 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 ADAMTSL5Q6ZMM2 481 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 LINC01551Q86U37 167 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 RNF182Q8N6D2 247 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 TMEM99Q8N816 258 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 APCDD1LQ8NCL9 501 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 GATAD1Q8WUU5 269 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 MUCL1Q96DR8 90 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 C4orf45Q96LM5 186 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 RBPJLQ9UBG7 517 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 KLK11Q9UBX7 282 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 PCOLCE2Q9UKZ9 415 aa3.11□□□□□ -1.91
USP53-205ENST00000509769 LOC105371242A0A075B767 164 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 PPIAL4CA0A0B4J2A2 164 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 A0A1W2PPI3 338 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 FAM72CH0Y354 149 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 J3QKU1 62 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 UPK1AO00322 258 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 TIMM8AO60220 97 aaPredicted RBP3.1□□□□□ -1.91
USP53-205ENST00000509769 EML2O95834 649 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 IGF2P01344 180 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 PPIAL4GP0DN37 164 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 TSPOP30536 169 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 CLDN2P57739 230 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 RND3P61587 244 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 Q0VG73 95 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 PDE6HQ13956 83 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 KLF17Q5JT82 389 aaPredicted RBP3.1□□□□□ -1.91
USP53-205ENST00000509769 FAM72DQ6L9T8 149 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 SLC48A1Q6P1K1 146 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 UNQ6494/PRO21346Q6UXR6 183 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 AMN1Q8IY45 258 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 OR11H6Q8NGC7 330 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 OR1B1Q8NGR6 318 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 OR14C36Q8NHC7 312 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 NT5CQ8TCD5 201 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 MYEOVQ96EZ4 313 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 IGFLR1Q9H665 355 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 FNDC4Q9H6D8 234 aaPredicted RBP3.1□□□□□ -1.91
USP53-205ENST00000509769 SIRT5Q9NXA8 310 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 IL17CQ9P0M4 197 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 CGGBP1Q9UFW8 167 aaPredicted RBP3.1□□□□□ -1.91
USP53-205ENST00000509769 TMEFF2Q9UIK5 374 aaPredicted RBP3.1□□□□□ -1.91
USP53-205ENST00000509769 EPDR1Q9UM22 224 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 DTX4Q9Y2E6 619 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 PTGDR2Q9Y5Y4 395 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 A0A1W2PS18 150 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 KLRC4-KLRK1H3BQV0 150 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 SOCS3O14543 225 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 CLDN7O95471 211 aa3.1□□□□□ -1.91
USP53-205ENST00000509769 B3GALT4O96024 378 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms