RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 CCL22O00626 93 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 DPM2O94777 84 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 CELA2BP08218 269 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-209ENST00000508871 MRPL3P09001 348 aaKnown RBP3.29□□□□□ -1.88
NEDD4-209ENST00000508871 EFNA1P20827 205 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-209ENST00000508871 TAS2R45P59539 299 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 COL5A1-AS1Q5SY13 56 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF440Q8IYI8 595 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 DEFB107AQ8IZN7 70 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 ZFAND1Q8TCF1 268 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 SSBP4Q9BWG4 385 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-209ENST00000508871 HCAR1Q9BXC0 346 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 BANF2Q9H503 90 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 TPSG1Q9NRR2 321 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 CALYQ9NYX4 217 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 ZFC3H1O60293 1989 aaKnown RBP3.29□□□□□ -1.88
NEDD4-209ENST00000508871 TEX50A0A1B0GTY4 177 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 B4DXG7 233 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 J3QT63 122 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 CDK2AP2O75956 126 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 GADD45GO95257 159 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 HOXD3P31249 432 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-209ENST00000508871 EFNA3P52797 238 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 LIM2P55344 173 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF92Q03936 586 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 AQP6Q13520 282 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 TMEM69Q5SWH9 247 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 GDPGP1Q6ZNW5 385 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 BCL6BQ8N143 479 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-209ENST00000508871 C20orf144Q9BQM9 153 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 MIXL1Q9H2W2 232 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 Q9H8V8 135 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 MCTS1Q9ULC4 181 aaKnown RBP3.29□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF256Q9Y2P7 627 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-209ENST00000508871 GON4LQ3T8J9 2241 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 GPR6P46095 362 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-209ENST00000508871 AMTP48728 403 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 DEFA5Q01523 94 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 IRF4Q15306 451 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 METRNLQ641Q3 311 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 ZFAND6Q6FIF0 208 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 FRMPD2BQ6IN97 320 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 FGFBP3Q8TAT2 258 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 BORCS8Q96FH0 119 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 YTHDF1Q9BYJ9 559 aaKnown RBP3.29□□□□□ -1.88
NEDD4-209ENST00000508871 PRSS22Q9GZN4 317 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 C17orf100A8MU93 164 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 ACOT8O14734 319 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 LINC01565O15544 149 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 REG1AP05451 166 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 LINC00032P0C843 101 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 HOXA5P20719 270 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 PKIAP61925 76 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 TBPL1P62380 186 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 RANP62826 216 aaKnown RBP3.28□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF154Q13106 437 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 FZD5Q13467 585 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 KIAA0040Q15053 153 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 LGALSLQ3ZCW2 172 aaPredicted RBP3.28□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF774Q6NX45 483 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 SLC36A1Q7Z2H8 476 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 P2RY8Q86VZ1 359 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 TEX29Q8N6K0 151 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 IL17DQ8TAD2 202 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 OR52A1Q9UKL2 312 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 KLF12Q9Y4X4 402 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 GAGE12JA6NER3 117 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 C9JQL5 133 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 SLC22A5O76082 557 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 GAGE7O76087 117 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 NRASP01111 189 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 HRASP01112 189 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 KRASP01116 189 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 MBPP02686 304 aaPredicted RBP3.28□□□□□ -1.88
NEDD4-209ENST00000508871 SNRPCP09234 159 aaKnown RBP3.28□□□□□ -1.88
NEDD4-209ENST00000508871 GAGE12FP0CL80 117 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 GAGE12GP0CL81 117 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 GAGE12IP0CL82 117 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 FGF5P12034 268 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 HOXB2P14652 356 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 ZP1P60852 638 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 SELENOWP63302 87 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 GAGE4Q13068 117 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 PRSS41Q7RTY9 318 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 RIMKLAQ8IXN7 391 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 PNKDQ8N490 385 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 C11orf42Q8N5U0 333 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 WFDC11Q8NEX6 87 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 BRK1Q8WUW1 75 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 ABHD14BQ96IU4 210 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 MEGF9Q9H1U4 602 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 MSL2Q9HCI7 577 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 CCDC167Q9P0B6 97 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 WASHC3Q9Y3C0 194 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 L3MBTL1Q9Y468 752 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 IGHV1-69DA0A0B4J2H0 117 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 OR5G3P0C626 314 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 CNTFRP26992 372 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 TPPP2P59282 170 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 PYCR3Q53H96 274 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms