RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 PPP1CAP62136 330 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 UBA52P62987 128 aaKnown RBP3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 EIF5AP63241 154 aaKnown RBP3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 TLE4Q04727 773 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 ZNF154Q13106 437 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 OR2F1Q13607 317 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 NNATQ16517 81 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 ATP6V1FQ16864 119 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 LINC00303Q3SY05 128 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 VWA2Q5GFL6 755 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 NHLRC3Q5JS37 347 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 C3orf33Q6P1S2 294 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 C3P1Q6ZMU1 363 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 CHMP1BQ7LBR1 199 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 HSD17B13Q7Z5P4 300 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 SLC51BQ86UW2 128 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 ZNF584Q8IVC4 421 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 C9orf40Q8IXQ3 194 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 SLC22A24Q8N4F4 322 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 ARRDC1Q8N5I2 433 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 ZNF738Q8NE65 137 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 SLC26A10Q8NG04 563 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 OR5AP2Q8NGF4 316 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 OR1J4Q8NGS1 313 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 OR6K3Q8NGY3 331 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 RNF133Q8WVZ7 376 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 SEC22AQ96IW7 307 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 TMEM59Q9BXS4 323 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 CST11Q9H112 138 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 TCEAL2Q9H3H9 227 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 METTL17Q9H7H0 456 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 PTGES2Q9H7Z7 377 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 TMEM138Q9NPI0 162 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 ZNF391Q9UJN7 358 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 RAB22AQ9UL26 194 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 F5P12259 2224 aa3.41□□□□□ -1.86
CALCOCO2-208ENST00000506971 TDRD6O60522 2096 aaKnown RBP3.4□□□□□ -1.86
CALCOCO2-208ENST00000506971 A0A0B4J2A0 478 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 IGHV5-51A0A0C4DH38 117 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 TMEM269A0A1B0GVZ9 245 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 LOC107986453A0A1B0GWG9 222 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 KANTRA0A1W2PQU2 76 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 EPOPA6NHQ4 379 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 MSGN1A6NI15 193 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 RFPL4AA6NLU0 287 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 GJE1A6NN92 205 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 CEACAM18A8MTB9 384 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 LEUTXA8MZ59 168 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 RFPL4AL1F8VTS6 287 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 DCTN6O00399 190 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 CCL21O00585 134 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 TP53I11O14683 189 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 TNFSF11O14788 317 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 PPP1R2P9O14990 202 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 SLC16A7O60669 478 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 EIF1BO60739 113 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 MPDU1O75352 247 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 SRSF10O75494 262 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 ZFAND5O76080 213 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 RAB3DO95716 219 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 ACTL6AO96019 429 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 IGHG1P01857 330 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 MAS1P04201 325 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 GP1BAP07359 652 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 CD55P08174 381 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 WNT2P09544 360 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 OR9G9P0C7N8 305 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 ZNF17P17021 662 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 RAB3AP20336 220 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 BCL3P20749 454 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 CCL1P22362 96 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 PTGDSP41222 190 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 GUCA1AP43080 201 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 EFNA3P52797 238 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 GFERP55789 205 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 TAS2R46P59540 309 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 SNRPD2P62316 118 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 GRB2P62993 217 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 SURF2Q15527 256 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 C5orf64Q2M2E5 130 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 LGALSLQ3ZCW2 172 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 Q5BKY6 102 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 RNASE10Q5GAN6 216 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 ACER2Q5QJU3 275 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 EIF5AL1Q6IS14 154 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 SSX7Q7RTT5 188 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 COMMD7Q86VX2 200 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 STX12Q86Y82 276 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 BOD1L2Q8IYS8 172 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 STPG2Q8N412 459 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 C12orf45Q8N5I9 185 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 OR5D14Q8NGL3 314 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 OR4C16Q8NGL9 310 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 GPR119Q8TDV5 335 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 RBPMSQ93062 196 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 C11orf52Q96A22 123 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 CPNE4Q96A23 557 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 SLC25A44Q96H78 314 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 PHB2Q99623 299 aa3.4□□□□□ -1.87
CALCOCO2-208ENST00000506971 NUDT9Q9BW91 350 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms