RNA–Protein interactions for RNA: ENST00000505976.5

OTUD4-206, Transcript of OTU deubiquitinase 4, human

TSL 5

Gene OTUD4, Length 671 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
OTUD4-206	ENST00000505976	SORL1	Q92673	2214 aa		13.44	□□□□□ -0.26
OTUD4-206	ENST00000505976	IGKV1-6	A0A0C4DH72	117 aa		13.44	□□□□□ -0.26
OTUD4-206	ENST00000505976	FCN1	O00602	326 aa		13.44	□□□□□ -0.26
OTUD4-206	ENST00000505976	RBBP9	O75884	186 aa		13.44	□□□□□ -0.26
OTUD4-206	ENST00000505976	CALR	P27797	417 aa	Known RBP	13.44	□□□□□ -0.26
OTUD4-206	ENST00000505976	CEACAM6	P40199	344 aa		13.44	□□□□□ -0.26
OTUD4-206	ENST00000505976	CLDN12	P56749	244 aa		13.44	□□□□□ -0.26
OTUD4-206	ENST00000505976	ZNF260	Q3ZCT1	412 aa		13.44	□□□□□ -0.26
OTUD4-206	ENST00000505976	PLAC9	Q5JTB6	97 aa		13.44	□□□□□ -0.26
OTUD4-206	ENST00000505976	OR1N2	Q8NGR9	330 aa		13.44	□□□□□ -0.26
OTUD4-206	ENST00000505976	FAM3D	Q96BQ1	224 aa		13.44	□□□□□ -0.26
OTUD4-206	ENST00000505976	OR5B12	Q96R08	314 aa		13.44	□□□□□ -0.26
OTUD4-206	ENST00000505976	MGLL	Q99685	303 aa		13.44	□□□□□ -0.26
OTUD4-206	ENST00000505976	RNF5	Q99942	180 aa		13.44	□□□□□ -0.26
OTUD4-206	ENST00000505976		A0A1W2PN81	502 aa		13.43	□□□□□ -0.26
OTUD4-206	ENST00000505976	HSPA12A	O43301	675 aa		13.43	□□□□□ -0.26
OTUD4-206	ENST00000505976	CHRNA7	P36544	502 aa		13.43	□□□□□ -0.26
OTUD4-206	ENST00000505976	ECI1	P42126	302 aa		13.43	□□□□□ -0.26
OTUD4-206	ENST00000505976	MAP2K4	P45985	399 aa		13.43	□□□□□ -0.26
OTUD4-206	ENST00000505976	PLA2G7	Q13093	441 aa		13.43	□□□□□ -0.26
OTUD4-206	ENST00000505976	ECSCR	Q19T08	205 aa		13.43	□□□□□ -0.26
OTUD4-206	ENST00000505976	C2orf76	Q3KRA6	126 aa		13.43	□□□□□ -0.26
OTUD4-206	ENST00000505976	TCTEX1D1	Q8N7M0	179 aa		13.43	□□□□□ -0.26
OTUD4-206	ENST00000505976	OR56B1	Q8NGI3	324 aa		13.43	□□□□□ -0.26
OTUD4-206	ENST00000505976	CMSS1	Q9BQ75	279 aa	Known RBP	13.43	□□□□□ -0.26
OTUD4-206	ENST00000505976	CCDC90B	Q9GZT6	254 aa		13.43	□□□□□ -0.26
OTUD4-206	ENST00000505976	TOLLIP	Q9H0E2	274 aa		13.43	□□□□□ -0.26
OTUD4-206	ENST00000505976	GAB2	Q9UQC2	676 aa		13.43	□□□□□ -0.26
OTUD4-206	ENST00000505976	FOXA2	Q9Y261	457 aa	Predicted RBP	13.43	□□□□□ -0.26
OTUD4-206	ENST00000505976		V9GY05	133 aa		13.43	□□□□□ -0.26
OTUD4-206	ENST00000505976	TMEM272	A0A1B0GTI8	110 aa		13.42	□□□□□ -0.26
OTUD4-206	ENST00000505976		H7C2Y5	167 aa		13.42	□□□□□ -0.26
OTUD4-206	ENST00000505976	GSTP1	P09211	210 aa	Known RBP	13.42	□□□□□ -0.26
OTUD4-206	ENST00000505976	SNRPB	P14678	240 aa	Known RBP	13.42	□□□□□ -0.26
OTUD4-206	ENST00000505976	INSL3	P51460	131 aa		13.42	□□□□□ -0.26
OTUD4-206	ENST00000505976	TBCE	Q15813	527 aa	Predicted RBP	13.42	□□□□□ -0.26
OTUD4-206	ENST00000505976	CD200R1L	Q6Q8B3	271 aa		13.42	□□□□□ -0.26
OTUD4-206	ENST00000505976	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.42	□□□□□ -0.26
OTUD4-206	ENST00000505976	DCUN1D4	Q92564	292 aa		13.42	□□□□□ -0.26
OTUD4-206	ENST00000505976	ALX4	Q9H161	411 aa	Predicted RBP	13.42	□□□□□ -0.26
OTUD4-206	ENST00000505976	ACOT13	Q9NPJ3	140 aa		13.42	□□□□□ -0.26
OTUD4-206	ENST00000505976	TPSG1	Q9NRR2	321 aa		13.42	□□□□□ -0.26
OTUD4-206	ENST00000505976	RNF150	Q9ULK6	438 aa		13.42	□□□□□ -0.26
OTUD4-206	ENST00000505976	KCNK7	Q9Y2U2	307 aa		13.42	□□□□□ -0.26
OTUD4-206	ENST00000505976	SHISA3	A0PJX4	238 aa		13.41	□□□□□ -0.26
OTUD4-206	ENST00000505976	TRDC	B7Z8K6	153 aa		13.41	□□□□□ -0.26
OTUD4-206	ENST00000505976	DENR	O43583	198 aa	Known RBP	13.41	□□□□□ -0.26
OTUD4-206	ENST00000505976	IGKV1-16	P04430	117 aa		13.41	□□□□□ -0.26
OTUD4-206	ENST00000505976	RANBP1	P43487	201 aa		13.41	□□□□□ -0.26
OTUD4-206	ENST00000505976	LINC00205	P59089	165 aa		13.41	□□□□□ -0.26
OTUD4-206	ENST00000505976	PLGLA	Q15195	96 aa		13.41	□□□□□ -0.26
OTUD4-206	ENST00000505976	PSG5	Q15238	335 aa		13.41	□□□□□ -0.26
OTUD4-206	ENST00000505976	SSX1	Q16384	188 aa		13.41	□□□□□ -0.26
OTUD4-206	ENST00000505976	HES5	Q5TA89	166 aa		13.41	□□□□□ -0.26
OTUD4-206	ENST00000505976	ZNF383	Q8NA42	475 aa		13.41	□□□□□ -0.26
OTUD4-206	ENST00000505976	CASTOR1	Q8WTX7	329 aa		13.41	□□□□□ -0.26
OTUD4-206	ENST00000505976	WWC2-AS2	Q96NR7	200 aa		13.41	□□□□□ -0.26
OTUD4-206	ENST00000505976	RAB22A	Q9UL26	194 aa		13.41	□□□□□ -0.26
OTUD4-206	ENST00000505976	SPDEF	O95238	335 aa		13.4	□□□□□ -0.26
OTUD4-206	ENST00000505976	NHLRC4	P0CG21	123 aa	Predicted RBP	13.4	□□□□□ -0.26
OTUD4-206	ENST00000505976	PSMD7	P51665	324 aa		13.4	□□□□□ -0.26
OTUD4-206	ENST00000505976	MOGAT2	Q3SYC2	334 aa		13.4	□□□□□ -0.26
OTUD4-206	ENST00000505976	AKIRIN2	Q53H80	203 aa		13.4	□□□□□ -0.26
OTUD4-206	ENST00000505976	ZNF562	Q6V9R5	426 aa		13.4	□□□□□ -0.26
OTUD4-206	ENST00000505976	PPP1R27	Q86WC6	154 aa		13.4	□□□□□ -0.26
OTUD4-206	ENST00000505976	PDPN	Q86YL7	162 aa		13.4	□□□□□ -0.26
OTUD4-206	ENST00000505976	OR4A4P	Q8NGN8	299 aa		13.4	□□□□□ -0.26
OTUD4-206	ENST00000505976	FAM103A1	Q9BTL3	118 aa	Known RBP	13.4	□□□□□ -0.26
OTUD4-206	ENST00000505976	RDH8	Q9NYR8	311 aa		13.4	□□□□□ -0.26
OTUD4-206	ENST00000505976	METTL1	Q9UBP6	276 aa	Known RBP	13.4	□□□□□ -0.26
OTUD4-206	ENST00000505976	ZNF221	Q9UK13	617 aa		13.4	□□□□□ -0.26
OTUD4-206	ENST00000505976	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.4	□□□□□ -0.26
OTUD4-206	ENST00000505976	A3GALT2	U3KPV4	340 aa		13.4	□□□□□ -0.26
OTUD4-206	ENST00000505976	LINC01619	G3V211	115 aa		13.39	□□□□□ -0.27
OTUD4-206	ENST00000505976	OVOL1	O14753	267 aa		13.39	□□□□□ -0.27
OTUD4-206	ENST00000505976	CA2	P00918	260 aa		13.39	□□□□□ -0.27
OTUD4-206	ENST00000505976	TFAP2A	P05549	437 aa		13.39	□□□□□ -0.27
OTUD4-206	ENST00000505976	LGALS1	P09382	135 aa	Known RBP	13.39	□□□□□ -0.27
OTUD4-206	ENST00000505976	SLURP1	P55000	103 aa		13.39	□□□□□ -0.27
OTUD4-206	ENST00000505976	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.39	□□□□□ -0.27
OTUD4-206	ENST00000505976	PYHIN1	Q6K0P9	492 aa		13.39	□□□□□ -0.27
OTUD4-206	ENST00000505976	UNQ5815/PRO19632	Q6UWF5	114 aa		13.39	□□□□□ -0.27
OTUD4-206	ENST00000505976	ZNF367	Q7RTV3	350 aa		13.39	□□□□□ -0.27
OTUD4-206	ENST00000505976	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.39	□□□□□ -0.27
OTUD4-206	ENST00000505976	DLX4	Q92988	240 aa	Predicted RBP	13.39	□□□□□ -0.27
OTUD4-206	ENST00000505976	CLCC1	Q96S66	551 aa		13.39	□□□□□ -0.27
OTUD4-206	ENST00000505976	TSNAX	Q99598	290 aa	Known RBP	13.39	□□□□□ -0.27
OTUD4-206	ENST00000505976	CABLES2	Q9BTV7	478 aa		13.39	□□□□□ -0.27
OTUD4-206	ENST00000505976	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
OTUD4-206	ENST00000505976	KMT2C	Q8NEZ4	4911 aa	Known RBP	13.38	□□□□□ -0.27
OTUD4-206	ENST00000505976	IGHV4OR15-8	A0A075B7B6	117 aa		13.38	□□□□□ -0.27
OTUD4-206	ENST00000505976		A0A087WW49	117 aa		13.38	□□□□□ -0.27
OTUD4-206	ENST00000505976	TRAV1-2	A0A0B4J238	106 aa		13.38	□□□□□ -0.27
OTUD4-206	ENST00000505976	FABP7	O15540	132 aa		13.38	□□□□□ -0.27
OTUD4-206	ENST00000505976	FCGR3A	P08637	254 aa		13.38	□□□□□ -0.27
OTUD4-206	ENST00000505976	CD3G	P09693	182 aa		13.38	□□□□□ -0.27
OTUD4-206	ENST00000505976	SERPINB10	P48595	397 aa		13.38	□□□□□ -0.27
OTUD4-206	ENST00000505976	OR10A3	P58181	314 aa		13.38	□□□□□ -0.27
OTUD4-206	ENST00000505976	RPS16	P62249	146 aa	Known RBP	13.38	□□□□□ -0.27
OTUD4-206	ENST00000505976	ACTBL2	Q562R1	376 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms