RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 NF1P21359 2839 aa8.33□□□□□ -1.08
RFC1-210ENST00000505077 SAA2-SAA4A0A096LPE2 208 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 LY6LH3BQJ8 138 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 HSD17B6O14756 317 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 SLC31A2O15432 143 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 ST8SIA5O15466 376 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 IGHV3-7P01780 117 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 SAA2P0DJI9 122 aaPredicted RBP8.32□□□□□ -1.08
RFC1-210ENST00000505077 DLX1P56177 255 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 FXYD4P59646 89 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 SCGB2B2Q4G0G5 96 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 UTF1Q5T230 341 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 TPTE2P1Q5T6R2 138 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 FAAP20Q6NZ36 180 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 ODF3L1Q8IXM7 274 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 BVESQ8NE79 360 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 ZFAND1Q8TCF1 268 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 TOMM40LQ969M1 308 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 ST6GALNAC6Q969X2 333 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 ADTRPQ96IZ2 230 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 HSD17B10Q99714 261 aaKnown RBP8.32□□□□□ -1.08
RFC1-210ENST00000505077 SMR3AQ99954 134 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 SLC5A7Q9GZV3 580 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 MS4A7Q9GZW8 240 aaPredicted RBP8.32□□□□□ -1.08
RFC1-210ENST00000505077 FAM96BQ9Y3D0 163 aa8.32□□□□□ -1.08
RFC1-210ENST00000505077 IGKV1D-13A0A0B4J2D9 117 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 A0A1W2PPE3 182 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 OR5H14A6NHG9 310 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 RNF212BA8MTL3 300 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 VGLL3A8MV65 326 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 GPR31O00270 319 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 PLA2G10O15496 165 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 GAPDHP04406 335 aaKnown RBP8.31□□□□□ -1.08
RFC1-210ENST00000505077 IGKV1-13P0DP09 117 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 DYNLT3P51808 116 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 HABP2Q14520 560 aaPredicted RBP8.31□□□□□ -1.08
RFC1-210ENST00000505077 FAM53AQ6NSI3 398 aaPredicted RBP8.31□□□□□ -1.08
RFC1-210ENST00000505077 BRD3OSQ6XYD6 125 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 ZNF66Q6ZN08 573 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 LDLRAD3Q86YD5 345 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 TGIF2LXQ8IUE1 241 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 PDZD9Q8IXQ8 264 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 DRAM1Q8N682 238 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 ZDHHC22Q8N966 263 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 SECTM1Q8WVN6 248 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 RTN4IP1Q8WWV3 396 aaPredicted RBP8.31□□□□□ -1.08
RFC1-210ENST00000505077 ABHD14BQ96IU4 210 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 BEX2Q9BXY8 128 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 TBC1D24Q9ULP9 559 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 TNCP24821 2201 aa8.31□□□□□ -1.08
RFC1-210ENST00000505077 JMJD1CQ15652 2540 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 B3GALNT1O75752 331 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 NDUFB6O95139 128 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 PTTG1O95997 202 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 IGLV2-14P01704 120 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 CTSDP07339 412 aaPredicted RBP8.3□□□□□ -1.08
RFC1-210ENST00000505077 SRD5A1P18405 259 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 SLC6A1P30531 599 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 BRS3P32247 399 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 BTCP35070 178 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 THBS3P49746 956 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 RAB13P51153 203 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 RND3P61587 244 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 PRB3Q04118 309 aaPredicted RBP8.3□□□□□ -1.08
RFC1-210ENST00000505077 CATR1Q13166 79 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 SSX2Q16385 188 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 ABCA11PQ4W5N1 156 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 RUSC1-AS1Q66K80 236 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 C11orf88Q6PI97 169 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 TCTEX1D1Q8N7M0 179 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 CCDC71LQ8N9Z2 235 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 OR13C8Q8NGS7 320 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 MRGPRFQ96AM1 343 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 ZNF251Q9BRH9 671 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 MEGF9Q9H1U4 602 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 DPAGT1Q9H3H5 408 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 PRDM13Q9H4Q3 707 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 LIN7CQ9NUP9 197 aaKnown RBP8.3□□□□□ -1.08
RFC1-210ENST00000505077 SDHAF2Q9NX18 166 aa8.3□□□□□ -1.08
RFC1-210ENST00000505077 C14orf166Q9Y224 244 aaKnown RBP8.3□□□□□ -1.08
RFC1-210ENST00000505077 IGHV3OR16-10A0A075B7F0 116 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 IGHV1-3A0A0C4DH29 117 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 A0A0U1RQK1 487 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 LINC00854A0A1B0GVQ3 168 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 FAM240BA0A1B0GVZ2 78 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 A0A1W2PPI3 338 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 M0R1X1 148 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 APOA2P02652 100 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 RRASP10301 218 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 PGAM2P15259 253 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 GNRHRP30968 328 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 MC5RP33032 325 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 KIR2DS2P43631 304 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 TAS2R31P59538 309 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 UBE2MP61081 183 aaKnown RBP8.29□□□□□ -1.08
RFC1-210ENST00000505077 IFITM3Q01628 133 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 CBX3Q13185 183 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 LRRC75BQ2VPJ9 315 aa8.29□□□□□ -1.08
RFC1-210ENST00000505077 DHRS7BQ6IAN0 325 aaPredicted RBP8.29□□□□□ -1.08
RFC1-210ENST00000505077 ZNF818PQ6ZRF7 136 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms