RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 SSTR5P35346 364 aa8.15□□□□□ -1.1
COL1A1-210ENST00000504289 GPR12P47775 334 aa8.15□□□□□ -1.1
COL1A1-210ENST00000504289 LOXL3P58215 753 aa8.15□□□□□ -1.1
COL1A1-210ENST00000504289 BSPH1Q075Z2 132 aa8.15□□□□□ -1.1
COL1A1-210ENST00000504289 ALKBH2Q6NS38 261 aa8.15□□□□□ -1.1
COL1A1-210ENST00000504289 C22orf34Q6ZV56 151 aa8.15□□□□□ -1.1
COL1A1-210ENST00000504289 BPIFCQ8NFQ6 507 aa8.15□□□□□ -1.1
COL1A1-210ENST00000504289 TCTEX1D2Q8WW35 142 aa8.15□□□□□ -1.1
COL1A1-210ENST00000504289 RNASE6Q93091 150 aaKnown RBP8.15□□□□□ -1.1
COL1A1-210ENST00000504289 SEC11CQ9BY50 192 aa8.15□□□□□ -1.1
COL1A1-210ENST00000504289 SMIM3Q9BZL3 60 aa8.15□□□□□ -1.1
COL1A1-210ENST00000504289 PARP12Q9H0J9 701 aaKnown RBP8.15□□□□□ -1.1
COL1A1-210ENST00000504289 CALYQ9NYX4 217 aa8.15□□□□□ -1.1
COL1A1-210ENST00000504289 GNG12Q9UBI6 72 aa8.15□□□□□ -1.1
COL1A1-210ENST00000504289 NDRG3Q9UGV2 375 aa8.15□□□□□ -1.1
COL1A1-210ENST00000504289 CARHSP1Q9Y2V2 147 aaKnown RBP8.15□□□□□ -1.1
COL1A1-210ENST00000504289 PRELID3BQ9Y3B1 194 aa8.15□□□□□ -1.1
COL1A1-210ENST00000504289 USF3Q68DE3 2245 aa8.15□□□□□ -1.1
COL1A1-210ENST00000504289 DSPP15924 2871 aaKnown RBP8.14□□□□□ -1.11
COL1A1-210ENST00000504289 A0A0G2JRQ6 117 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 hADV38S2A0JD32 116 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 B9A039 149 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 SOX15O60248 233 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 ZG16O60844 167 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 TMEM50AO95807 157 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 TSPAN15O95858 294 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 HPRT1P00492 218 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 CD5P06127 495 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 ZNF16P17020 682 aaPredicted RBP8.14□□□□□ -1.11
COL1A1-210ENST00000504289 APOBEC3AP31941 199 aaPredicted RBP8.14□□□□□ -1.11
COL1A1-210ENST00000504289 DUTP33316 252 aaKnown RBP8.14□□□□□ -1.11
COL1A1-210ENST00000504289 DVL1P1P54792 670 aaPredicted RBP8.14□□□□□ -1.11
COL1A1-210ENST00000504289 UBE2KP61086 200 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 TAGLNQ01995 201 aaKnown RBP8.14□□□□□ -1.11
COL1A1-210ENST00000504289 TNFRSF9Q07011 255 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 EDDM3AQ14507 147 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 PDLIM3Q53GG5 364 aaPredicted RBP8.14□□□□□ -1.11
COL1A1-210ENST00000504289 Q6ZRG5 221 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 Q6ZRM9 215 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 SVBPQ8N300 66 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 KDF1Q8NAX2 398 aaPredicted RBP8.14□□□□□ -1.11
COL1A1-210ENST00000504289 OR5C1Q8NGR4 320 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 OR52E5Q8NH55 327 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 SUN5Q8TC36 379 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 RAB39BQ96DA2 213 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 GAFA1Q96PS6 74 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 GPHA2Q96T91 129 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 AIFM2Q9BRQ8 373 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 PSMG3Q9BT73 122 aaPredicted RBP8.14□□□□□ -1.11
COL1A1-210ENST00000504289 MAGT1Q9H0U3 335 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 NARFLQ9H6Q4 476 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 GFOD1Q9NXC2 390 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 PSENENQ9NZ42 101 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 PSG11Q9UQ72 335 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 LINC00312Q9Y6C7 94 aa8.14□□□□□ -1.11
COL1A1-210ENST00000504289 EPHA1P21709 976 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 ATP6V0CP27449 155 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 CD80P33681 288 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 CAMLGP49069 296 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 THBS3P49746 956 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 DYNLT3P51808 116 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 RPL30P62888 115 aaKnown RBP8.13□□□□□ -1.11
COL1A1-210ENST00000504289 SERF2P84101 59 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 PEA15Q15121 130 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 TMEM14EPQ6UXP3 125 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 H2BFWTQ7Z2G1 175 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 PUSL1Q8N0Z8 303 aaKnown RBP8.13□□□□□ -1.11
COL1A1-210ENST00000504289 C8orf31Q8N9H6 132 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 BOLLQ8N9W6 283 aaKnown RBP8.13□□□□□ -1.11
COL1A1-210ENST00000504289 ZNRF1Q8ND25 227 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 BSCL2Q96G97 398 aaPredicted RBP8.13□□□□□ -1.11
COL1A1-210ENST00000504289 C5orf30Q96GV9 206 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 WFIKKN1Q96NZ8 548 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 PBDC1Q9BVG4 233 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 HRH4Q9H3N8 390 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 GAL3ST2Q9H3Q3 398 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 C19orf12Q9NSK7 152 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 UQCC1Q9NVA1 299 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 COQ3Q9NZJ6 369 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 KAAG1Q9UBP8 84 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 RALYQ9UKM9 306 aaKnown RBP8.13□□□□□ -1.11
COL1A1-210ENST00000504289 RAXQ9Y2V3 346 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 SPTA1P02549 2419 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 ZFHX4Q86UP3 3567 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 PIEZO2Q9H5I5 2752 aa8.13□□□□□ -1.11
COL1A1-210ENST00000504289 PPIAL4EA0A075B759 164 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 IGHV3OR15-7A0A075B7D8 119 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 TRAV1-1A0A0B4J248 108 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 TRGV8A0A0C4DH27 118 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 C17orf98A8MV24 154 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 SHISA9B4DS77 424 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 PPIAL4DF5H284 164 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 RNASEK-C17orf49H0YIS7 233 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 TMEM178BH3BS89 294 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 PPIHO43447 177 aaKnown RBP8.12□□□□□ -1.11
COL1A1-210ENST00000504289 HBE1P02100 147 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 APOC3P02656 99 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 PRH1P02810 166 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 CD3EP07766 207 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 PPIAL4FP0DN26 164 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms