RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 MCM3APO60318 1980 aa6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 PGLYRP1O75594 196 aaPredicted RBP6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 IGHMP01871 453 aa6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 BTF3P20290 206 aaKnown RBP6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 FCGR2BP31994 310 aaPredicted RBP6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 STPG3Q8N7X2 389 aa6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 ZNF430Q9H8G1 570 aaPredicted RBP6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 TMEM56-RWDD3S4R434 201 aa6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 WNK3Q9BYP7 1800 aa6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 TRBV5-5A0A0J9YX44 114 aa6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 C4orf51C9J302 202 aa6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 REG1AP05451 166 aa6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 SEC11BP0C7V7 166 aa6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 LINC00869P0C866 280 aa6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 GCSHP23434 173 aa6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 TCTAP57738 103 aa6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 DNASE2BQ8WZ79 361 aa6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 EEF1AKMT3Q96AZ1 226 aa6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 ZFP30Q9Y2G7 519 aa6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 TUBGCP6Q96RT7 1819 aa6.18□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM90A10PA6NDY2 464 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM90A18PA6NE21 464 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM90A16PA6NEW6 464 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM90A20PA6NIJ5 464 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM90A8PA6NJQ4 464 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM90A7PA6NKC0 464 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM90A22PA8MWA6 464 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM90A12PA8MX19 464 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM90A5PA8MXJ8 464 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM90A23PA8MXZ1 464 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 ZNF324O75467 553 aaPredicted RBP6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM90A15PP0C7V4 464 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM90A13PP0C7W8 464 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM90A14PP0C7W9 464 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM90A24PP0C7X0 464 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 ZNF345Q14585 488 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 VAX1Q5SQQ9 334 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 STPG2Q8N412 459 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 DDB2Q92466 427 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 LEAP2Q969E1 77 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 TBX15Q96SF7 602 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 SLC25A33Q9BSK2 321 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 IFT22Q9H7X7 185 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 HSF4Q9ULV5 492 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 TNFSF18Q9UNG2 199 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 TRAV30A0A087WSZ9 112 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 IGLV1-36A0A0B4J1U3 117 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 PLAUP00749 431 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 THY1P04216 161 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 CTSBP07858 339 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 CENPVQ7Z7K6 275 aaPredicted RBP6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 OR52M1Q8NGK5 317 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 TMEM222Q9H0R3 208 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM206AQ9NX38 181 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 KCNK7Q9Y2U2 307 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 TRAV20A0A0B4J274 112 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 A0A1W2PQM1 296 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 ISG15P05161 165 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 ARF6P62330 175 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 BPIFA4PQ86YQ2 179 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 DLL3Q9NYJ7 618 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 LHFPL6Q9Y693 200 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 A6NDN8 102 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 SLC25A17O43808 307 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 VSIG10L2P0DP72 767 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 CXorf66Q5JRM2 361 aaPredicted RBP6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 SAXO1Q8IYX7 474 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 H1FOOQ8IZA3 346 aaPredicted RBP6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 RAB37Q96AX2 223 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 HSPB7Q9UBY9 170 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 PITPNC1Q9UKF7 332 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 IFITM10A6NMD0 228 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 CX3CL1P78423 397 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 RELBQ01201 579 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 PET117Q6UWS5 81 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 PNKDQ8N490 385 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM181AQ8N9Y4 354 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 OR4B1Q8NGF8 309 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 AMELYQ99218 206 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 CLEC7AQ9BXN2 247 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 WNT5BQ9H1J7 359 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 OR5AC2Q9NZP5 309 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 ODAMA1E959 279 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM74A7A6NL05 159 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 B9A039 149 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 NPIPB6E9PJ23 425 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 GREM1O60565 184 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 RELQ04864 619 aaPredicted RBP6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 CBLN2Q8IUK8 224 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 MUC15Q8N387 334 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 MIEN1Q9BRT3 115 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 JPT1Q9UK76 154 aa6.17□□□□□ -1.42
SYNPO2-205ENST00000504178 SBF2Q86WG5 1849 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 C7orf77A4D0Y5 90 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 BCL2P10415 239 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 RUNX1Q01196 453 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 ZNF79Q15937 498 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 ACSF3Q4G176 576 aaPredicted RBP6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 FAM209AQ5JX71 171 aa6.16□□□□□ -1.42
SYNPO2-205ENST00000504178 RTN4RQ9BZR6 473 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms