RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 PLPP3O14495 311 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 FGF1P05230 155 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 CXCL1P09341 107 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 RPS24P62847 133 aaKnown RBP5.4□□□□□ -1.55
CLCN3-204ENST00000504131 RPS27LQ71UM5 84 aaKnown RBP5.4□□□□□ -1.55
CLCN3-204ENST00000504131 OSR2Q8N2R0 312 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 TMEM125Q96AQ2 219 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 PLPPR2Q96GM1 343 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 TMEM59Q9BXS4 323 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 PLEKHA3Q9HB20 300 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 PRTFDC1Q9NRG1 225 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 KCPQ6ZWJ8 1503 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 KNCNA6PVL3 124 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 SNURFLB1AK76 121 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 EEDO75530 441 aaKnown RBP5.4□□□□□ -1.55
CLCN3-204ENST00000504131 ADIGQ0VDE8 80 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 EIF4EBP2Q13542 120 aaPredicted RBP5.4□□□□□ -1.55
CLCN3-204ENST00000504131 GGTLC2Q14390 218 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 ANKRD37Q7Z713 158 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 TMEM219Q86XT9 240 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 SLC37A2Q8TED4 501 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 PIGCQ92535 297 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 KLHDC7BQ96G42 594 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 Q9N2J8 555 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 PRR33A8MZF0 331 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 H3BRM9 83 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 CCDC179H3BU77 68 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 PRB4P10163 310 aaPredicted RBP5.39□□□□□ -1.55
CLCN3-204ENST00000504131 CRYBB3P26998 211 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 NDUFV3P56181 108 aaKnown RBP5.39□□□□□ -1.55
CLCN3-204ENST00000504131 RUNX1Q01196 453 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 SPATA31B1PQ5VZV4 182 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 RIMKLAQ8IXN7 391 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 CYB561D1Q8N8Q1 229 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 OR1L1Q8NH94 360 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 THEM6Q8WUY1 208 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 ARPC1AQ92747 370 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 MAL2Q969L2 176 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 APOBEC3DQ96AK3 386 aaPredicted RBP5.39□□□□□ -1.55
CLCN3-204ENST00000504131 MYH3P11055 1940 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 ZNF646O15015 1829 aaPredicted RBP5.39□□□□□ -1.55
CLCN3-204ENST00000504131 TAF1LQ8IZX4 1826 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 F2RL2O00254 374 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 SH2D1BO14796 132 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 C1RP00736 705 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 HLA-DRB1P01911 266 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 FUT5Q11128 374 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 KIR3DS1Q14943 382 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 SLC25A35Q3KQZ1 300 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 C10orf111Q8N326 155 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 ARIH2OSQ8N7S6 290 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 SLC25A43Q8WUT9 341 aaPredicted RBP5.39□□□□□ -1.55
CLCN3-204ENST00000504131 PELI1Q96FA3 418 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 NMNAT3Q96T66 252 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 DDX60Q8IY21 1712 aaKnown RBP5.39□□□□□ -1.55
CLCN3-204ENST00000504131 USP17L23D6RBM5 183 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 ADCYAP1P18509 176 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 KLF17Q5JT82 389 aaPredicted RBP5.39□□□□□ -1.55
CLCN3-204ENST00000504131 SFTA2Q6UW10 78 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 GEMIN6Q8WXD5 167 aaKnown RBP5.39□□□□□ -1.55
CLCN3-204ENST00000504131 NUS1Q96E22 293 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 OR2A5Q96R48 311 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 RHNO1Q9BSD3 238 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 ZNF443Q9Y2A4 671 aaPredicted RBP5.39□□□□□ -1.55
CLCN3-204ENST00000504131 LOXL2Q9Y4K0 774 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 AFDNP55196 1824 aaKnown RBP5.39□□□□□ -1.55
CLCN3-204ENST00000504131 ZNF840PA6NDX5 716 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 MS4A18H0YCH9 400 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 GUSBP1Q15486 140 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 TMEM42Q69YG0 159 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 MAVSQ7Z434 540 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 FOXC2Q99958 501 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 VN1R3Q9BXE9 311 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 NPVFQ9HCQ7 196 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 MARCH2Q9P0N8 246 aa5.39□□□□□ -1.55
CLCN3-204ENST00000504131 MICAL3Q7RTP6 2002 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 TJP1Q07157 1748 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 WIPF1O43516 503 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 SPINK4O60575 86 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 GALR3O60755 368 aaPredicted RBP5.38□□□□□ -1.55
CLCN3-204ENST00000504131 LPAR6P43657 344 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 DCDP81605 110 aaKnown RBP5.38□□□□□ -1.55
CLCN3-204ENST00000504131 ATP5G2Q06055 141 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 UNC119Q13432 240 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 CXCL17Q6UXB2 119 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 OR2T6Q8NHC8 308 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 RNF128Q8TEB7 428 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 WIPF2Q8TF74 440 aaPredicted RBP5.38□□□□□ -1.55
CLCN3-204ENST00000504131 C2orf15Q8WU43 125 aaKnown RBP5.38□□□□□ -1.55
CLCN3-204ENST00000504131 SMIM4Q8WVI0 70 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 SARAFQ96BY9 339 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 DCBLD2Q96PD2 775 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 OR10A2Q9H208 303 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 OR2W1Q9Y3N9 320 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 NGFP01138 241 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 TACSTD2P09758 323 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 TSPO2Q5TGU0 170 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 MZB1Q8WU39 189 aa5.38□□□□□ -1.55
CLCN3-204ENST00000504131 MRPL53Q96EL3 112 aaKnown RBP5.38□□□□□ -1.55
CLCN3-204ENST00000504131 DERL3Q96Q80 235 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms