RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 RCC1LQ96I51 464 aaKnown RBP13.86□□□□□ -0.19
VCAN-204ENST00000502527 CISD1Q9NZ45 108 aaKnown RBP13.86□□□□□ -0.19
VCAN-204ENST00000502527 WASF3Q9UPY6 502 aa13.86□□□□□ -0.19
VCAN-204ENST00000502527 RAB29O14966 203 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 ADH4P08319 380 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 BCL2P10415 239 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 PRDX2P32119 198 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 BRWD1-AS2P59051 145 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 DLK1P80370 383 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 HTD2P86397 168 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 ATP6V1FQ16864 119 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 OR8G2PQ6IF36 304 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 ADAM5Q6NVV9 412 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 LCN15Q6UWW0 184 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 CD177Q8N6Q3 437 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 TPRX1Q8N7U7 411 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 OR2Z1Q8NG97 314 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 C12orf57Q99622 126 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 HSD17B10Q99714 261 aaKnown RBP13.85□□□□□ -0.19
VCAN-204ENST00000502527 TIMM9Q9Y5J7 89 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 SLC25A15Q9Y619 301 aa13.85□□□□□ -0.19
VCAN-204ENST00000502527 UBE2L5PA0A1B0GUS4 154 aa13.84□□□□□ -0.19
VCAN-204ENST00000502527 MBD3L4A6NDZ8 208 aaPredicted RBP13.84□□□□□ -0.19
VCAN-204ENST00000502527 MBD3L3A6NE82 208 aaPredicted RBP13.84□□□□□ -0.19
VCAN-204ENST00000502527 C5orf52A6NGY3 159 aa13.84□□□□□ -0.19
VCAN-204ENST00000502527 MBD3L5A6NJ08 208 aaPredicted RBP13.84□□□□□ -0.19
VCAN-204ENST00000502527 ZNF726P1Q15940 193 aa13.84□□□□□ -0.19
VCAN-204ENST00000502527 BTNL3Q6UXE8 466 aa13.84□□□□□ -0.19
VCAN-204ENST00000502527 MBD3L2Q8NHZ7 208 aaPredicted RBP13.84□□□□□ -0.19
VCAN-204ENST00000502527 MUCL1Q96DR8 90 aa13.84□□□□□ -0.19
VCAN-204ENST00000502527 YPEL4Q96NS1 127 aa13.84□□□□□ -0.19
VCAN-204ENST00000502527 CIB3Q96Q77 187 aaPredicted RBP13.84□□□□□ -0.19
VCAN-204ENST00000502527 FRYQ5TBA9 3013 aa13.84□□□□□ -0.19
VCAN-204ENST00000502527 EIF2S3P41091 472 aaKnown RBP13.84□□□□□ -0.19
VCAN-204ENST00000502527 H2BFWTQ7Z2G1 175 aa13.84□□□□□ -0.19
VCAN-204ENST00000502527 FAM90A1Q86YD7 464 aa13.84□□□□□ -0.19
VCAN-204ENST00000502527 RFESDQ8TAC1 157 aa13.84□□□□□ -0.19
VCAN-204ENST00000502527 ZNF665Q9H7R5 613 aa13.84□□□□□ -0.19
VCAN-204ENST00000502527 PSG11Q9UQ72 335 aa13.84□□□□□ -0.19
VCAN-204ENST00000502527 IGHV3-43A0A0B4J1X8 118 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 ZFP92A6NM28 416 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 C15orf65H3BRN8 121 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 IGHV3-43DP0DP04 118 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 GZMHP20718 246 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 NUBP1P53384 320 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 Q3ZCU0 254 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 EDARADDQ8WWZ3 215 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 CLN8Q9UBY8 286 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 CACNA1GO43497 2377 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 PCP4L1A6NKN8 68 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 UBE2CO00762 179 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 IFNA1P01562 189 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 IFNA17P01571 189 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 RAB11AP62491 216 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 EDDM3AQ14507 147 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 HEPN1Q6WQI6 88 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 SEM1Q6ZVN7 128 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 CENPVQ7Z7K6 275 aaPredicted RBP13.83□□□□□ -0.2
VCAN-204ENST00000502527 C1QL4Q86Z23 238 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 PPP1R35Q8TAP8 253 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 DTD1Q8TEA8 209 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 TMEM147Q9BVK8 224 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 MRPL37Q9BZE1 423 aaKnown RBP13.83□□□□□ -0.2
VCAN-204ENST00000502527 SIRT7Q9NRC8 400 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 DUSP13Q9UII6 198 aa13.83□□□□□ -0.2
VCAN-204ENST00000502527 CACNA1HO95180 2353 aa13.82□□□□□ -0.2
VCAN-204ENST00000502527 PRRC2CQ9Y520 2896 aaKnown RBP13.82□□□□□ -0.2
VCAN-204ENST00000502527 MAP1LC3B2A6NCE7 125 aa13.82□□□□□ -0.2
VCAN-204ENST00000502527 CXorf65A6NEN9 183 aa13.82□□□□□ -0.2
VCAN-204ENST00000502527 SRRM5B3KS81 715 aa13.82□□□□□ -0.2
VCAN-204ENST00000502527 B4DEV8 164 aa13.82□□□□□ -0.2
VCAN-204ENST00000502527 ST8SIA5O15466 376 aa13.82□□□□□ -0.2
VCAN-204ENST00000502527 ZNF737O75373 536 aa13.82□□□□□ -0.2
VCAN-204ENST00000502527 MEOX2P50222 304 aa13.82□□□□□ -0.2
VCAN-204ENST00000502527 FGF8P55075 233 aaPredicted RBP13.82□□□□□ -0.2
VCAN-204ENST00000502527 ELLP55199 621 aaPredicted RBP13.82□□□□□ -0.2
VCAN-204ENST00000502527 SSX7Q7RTT5 188 aa13.82□□□□□ -0.2
VCAN-204ENST00000502527 MRGPRGQ86SM5 289 aa13.82□□□□□ -0.2
VCAN-204ENST00000502527 IQCF2Q8IXL9 164 aa13.82□□□□□ -0.2
VCAN-204ENST00000502527 FAM216AQ8WUB2 273 aa13.82□□□□□ -0.2
VCAN-204ENST00000502527 P2RX4Q99571 388 aa13.82□□□□□ -0.2
VCAN-204ENST00000502527 AGMATQ9BSE5 352 aa13.82□□□□□ -0.2
VCAN-204ENST00000502527 MAP1LC3BQ9GZQ8 125 aa13.82□□□□□ -0.2
VCAN-204ENST00000502527 SEBOXQ9HB31 216 aaPredicted RBP13.82□□□□□ -0.2
VCAN-204ENST00000502527 KIAA2026Q5HYC2 2103 aa13.82□□□□□ -0.2
VCAN-204ENST00000502527 LINC00473A8K010 186 aa13.81□□□□□ -0.2
VCAN-204ENST00000502527 ZNF727A8MUV8 499 aa13.81□□□□□ -0.2
VCAN-204ENST00000502527 DEFB108AA8MXU0 73 aa13.81□□□□□ -0.2
VCAN-204ENST00000502527 EIF3GO75821 320 aaKnown RBP eCLIP13.81□□□□□ -0.2
VCAN-204ENST00000502527 CFHR2P36980 270 aa13.81□□□□□ -0.2
VCAN-204ENST00000502527 ZNF83P51522 516 aa13.81□□□□□ -0.2
VCAN-204ENST00000502527 PMS2P11Q13670 270 aa13.81□□□□□ -0.2
VCAN-204ENST00000502527 OR10P1Q8NGE3 313 aa13.81□□□□□ -0.2
VCAN-204ENST00000502527 DCTN5Q9BTE1 182 aa13.81□□□□□ -0.2
VCAN-204ENST00000502527 VAX2Q9UIW0 290 aa13.81□□□□□ -0.2
VCAN-204ENST00000502527 MGST3O14880 152 aa13.81□□□□□ -0.2
VCAN-204ENST00000502527 RBMXL2O75526 392 aaKnown RBP13.81□□□□□ -0.2
VCAN-204ENST00000502527 EGR1P18146 543 aa13.81□□□□□ -0.2
VCAN-204ENST00000502527 OR2B8PP59922 312 aa13.81□□□□□ -0.2
VCAN-204ENST00000502527 PNRC1Q12796 327 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms