RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 TMEM108Q6UXF1 575 aa13.03□□□□□ -0.32
C4A-259ENST00000498271 CRIPAKQ8N1N5 446 aa13.03□□□□□ -0.32
C4A-259ENST00000498271 GBGT1Q8N5D6 347 aa13.03□□□□□ -0.32
C4A-259ENST00000498271 TRAV9-1A0A075B6T8 112 aa13.02□□□□□ -0.32
C4A-259ENST00000498271 TMEM210A6NLX4 147 aa13.02□□□□□ -0.32
C4A-259ENST00000498271 MS4A18H0YCH9 400 aa13.02□□□□□ -0.32
C4A-259ENST00000498271 HPRT1P00492 218 aa13.02□□□□□ -0.32
C4A-259ENST00000498271 MS4A18Q3C1V0 323 aa13.02□□□□□ -0.32
C4A-259ENST00000498271 GALNT14Q96FL9 552 aa13.02□□□□□ -0.32
C4A-259ENST00000498271 SFRP2Q96HF1 295 aa13.02□□□□□ -0.32
C4A-259ENST00000498271 GRAMD2BQ96HH9 432 aa13.02□□□□□ -0.32
C4A-259ENST00000498271 ZNF716A6NP11 495 aa13.02□□□□□ -0.33
C4A-259ENST00000498271 PATE4P0C8F1 98 aa13.02□□□□□ -0.33
C4A-259ENST00000498271 COMPP49747 757 aaPredicted RBP13.02□□□□□ -0.33
C4A-259ENST00000498271 PRRX1P54821 245 aa13.02□□□□□ -0.33
C4A-259ENST00000498271 PRR33A8MZF0 331 aa13.02□□□□□ -0.33
C4A-259ENST00000498271 ZNF708P17019 499 aa13.02□□□□□ -0.33
C4A-259ENST00000498271 VASH2Q86V25 355 aa13.02□□□□□ -0.33
C4A-259ENST00000498271 SCARF2Q96GP6 870 aaPredicted RBP13.02□□□□□ -0.33
C4A-259ENST00000498271 HDHD3Q9BSH5 251 aaPredicted RBP13.02□□□□□ -0.33
C4A-259ENST00000498271 PAXXQ9BUH6 204 aa13.02□□□□□ -0.33
C4A-259ENST00000498271 OPN3Q9H1Y3 402 aaPredicted RBP13.02□□□□□ -0.33
C4A-259ENST00000498271 RNF224P0DH78 156 aa13.02□□□□□ -0.33
C4A-259ENST00000498271 AREGP15514 252 aa13.02□□□□□ -0.33
C4A-259ENST00000498271 OR1K1Q8NGR3 316 aa13.02□□□□□ -0.33
C4A-259ENST00000498271 OR2Y1Q8NGV0 311 aa13.02□□□□□ -0.33
C4A-259ENST00000498271 RAB1CQ92928 201 aa13.02□□□□□ -0.33
C4A-259ENST00000498271 SPAARA0A1B0GVQ0 90 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 NPIPB7O75200 414 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 CXorf67Q86X51 503 aaPredicted RBP13.01□□□□□ -0.33
C4A-259ENST00000498271 SELENOHQ8IZQ5 122 aaKnown RBP13.01□□□□□ -0.33
C4A-259ENST00000498271 SEC16AO15027 2179 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 IGHV5-10-1A0A0J9YXX1 117 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 FAM90A27PA6NNH2 459 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 CD3EP07766 207 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 FOXL2P58012 376 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 SNRNP40Q96DI7 357 aaKnown RBP13.01□□□□□ -0.33
C4A-259ENST00000498271 CLN8Q9UBY8 286 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 CCDC88CQ9P219 2028 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 EPOPA6NHQ4 379 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 DHRS7CA6NNS2 312 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 SYNGR1O43759 233 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 CSRP2Q16527 193 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 PSMG4Q5JS54 123 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 PMS2CLQ68D20 193 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 LSM10Q969L4 123 aaKnown RBP13.01□□□□□ -0.33
C4A-259ENST00000498271 PLPPR2Q96GM1 343 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 MIEN1Q9BRT3 115 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 DNAJC4Q9NNZ3 241 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 TMEM136Q6ZRR5 245 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 OR8B3Q8NGG8 313 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 RPEQ96AT9 228 aa13.01□□□□□ -0.33
C4A-259ENST00000498271 FBLL1A6NHQ2 334 aaKnown RBP13□□□□□ -0.33
C4A-259ENST00000498271 CCL4P13236 92 aa13□□□□□ -0.33
C4A-259ENST00000498271 UQCRFS1P47985 274 aa13□□□□□ -0.33
C4A-259ENST00000498271 RELBQ01201 579 aa13□□□□□ -0.33
C4A-259ENST00000498271 TMEM187Q14656 261 aa13□□□□□ -0.33
C4A-259ENST00000498271 SOSTQ9BQB4 213 aa13□□□□□ -0.33
C4A-259ENST00000498271 NEUROG3Q9Y4Z2 214 aa13□□□□□ -0.33
C4A-259ENST00000498271 F5H697 171 aa13□□□□□ -0.33
C4A-259ENST00000498271 SPRY3O43610 288 aa13□□□□□ -0.33
C4A-259ENST00000498271 PRSS12P56730 875 aa13□□□□□ -0.33
C4A-259ENST00000498271 OR1L8Q8NGR8 309 aa13□□□□□ -0.33
C4A-259ENST00000498271 ZNF501Q96CX3 271 aaPredicted RBP13□□□□□ -0.33
C4A-259ENST00000498271 DPRXA6NFQ7 191 aa13□□□□□ -0.33
C4A-259ENST00000498271 TSPAN7P41732 249 aa13□□□□□ -0.33
C4A-259ENST00000498271 MEOX1P50221 254 aa13□□□□□ -0.33
C4A-259ENST00000498271 SPSB4Q96A44 273 aa13□□□□□ -0.33
C4A-259ENST00000498271 CTHRC1Q96CG8 243 aa13□□□□□ -0.33
C4A-259ENST00000498271 SH3BGRL3Q9H299 93 aa13□□□□□ -0.33
C4A-259ENST00000498271 ZNF71Q9NQZ8 489 aaPredicted RBP13□□□□□ -0.33
C4A-259ENST00000498271 UFC1Q9Y3C8 167 aa13□□□□□ -0.33
C4A-259ENST00000498271 B4E171 279 aa13□□□□□ -0.33
C4A-259ENST00000498271 CTSBP07858 339 aa13□□□□□ -0.33
C4A-259ENST00000498271 SELENOTP62341 195 aa13□□□□□ -0.33
C4A-259ENST00000498271 PNPLA5Q7Z6Z6 429 aaPredicted RBP13□□□□□ -0.33
C4A-259ENST00000498271 NIT1Q86X76 327 aa13□□□□□ -0.33
C4A-259ENST00000498271 LURAP1LQ8IV03 231 aa13□□□□□ -0.33
C4A-259ENST00000498271 OR4C46A6NHA9 309 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 FTH1P19P0C7X4 201 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 SRIP30626 198 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 SAPCD1Q5SSQ6 148 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 CYP2G1PQ6ZSU1 146 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 C19orf24Q9BVV8 132 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 COX6CP09669 75 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 FGF12P61328 243 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 CXorf66Q5JRM2 361 aaPredicted RBP12.99□□□□□ -0.33
C4A-259ENST00000498271 RBKSQ9H477 322 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 SMOC1Q9H4F8 434 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 ZNF205O95201 554 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 SRP19P09132 144 aaKnown RBP12.99□□□□□ -0.33
C4A-259ENST00000498271 C2orf68Q2NKX9 166 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 GUCD1Q96NT3 240 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 SPAG17Q6Q759 2223 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 GCSHP23434 173 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 NPBWR2P48146 333 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 ZNF137PP52743 207 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 TTC32Q5I0X7 151 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 WDYHV1Q96HA8 205 aa12.99□□□□□ -0.33
C4A-259ENST00000498271 A0A0G2JK05 382 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms