RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 CLEC7AQ9BXN2 247 aa6.98□□□□□ -1.29
USP54-215ENST00000497106 A0A0B4J293 547 aa6.98□□□□□ -1.29
USP54-215ENST00000497106 GAPDHP04406 335 aaKnown RBP6.98□□□□□ -1.29
USP54-215ENST00000497106 OR8U8P0C7N1 319 aa6.98□□□□□ -1.29
USP54-215ENST00000497106 SNCAP37840 140 aa6.98□□□□□ -1.29
USP54-215ENST00000497106 ATP5J2P56134 94 aa6.98□□□□□ -1.29
USP54-215ENST00000497106 ANKRD55Q3KP44 614 aa6.98□□□□□ -1.29
USP54-215ENST00000497106 PINX1Q96BK5 328 aaKnown RBP6.98□□□□□ -1.29
USP54-215ENST00000497106 GNPNAT1Q96EK6 184 aaPredicted RBP6.98□□□□□ -1.29
USP54-215ENST00000497106 COQ2Q96H96 371 aa6.98□□□□□ -1.29
USP54-215ENST00000497106 HINT2Q9BX68 163 aa6.98□□□□□ -1.29
USP54-215ENST00000497106 COMMD5Q9GZQ3 224 aa6.98□□□□□ -1.29
USP54-215ENST00000497106 HEYLQ9NQ87 328 aaPredicted RBP6.98□□□□□ -1.29
USP54-215ENST00000497106 IGKV1D-8A0A087WSZ0 117 aa6.98□□□□□ -1.29
USP54-215ENST00000497106 SOX15O60248 233 aa6.98□□□□□ -1.29
USP54-215ENST00000497106 RAB32Q13637 225 aa6.98□□□□□ -1.29
USP54-215ENST00000497106 PHYHIPLQ96FC7 376 aa6.98□□□□□ -1.29
USP54-215ENST00000497106 CACNG5Q9UF02 275 aa6.98□□□□□ -1.29
USP54-215ENST00000497106 FAM90A9PA6NNJ1 464 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 I3L521 148 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 ADAP1O75689 374 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 RBP4P02753 201 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 BRS3P32247 399 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 ATP6V1FQ16864 119 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 AKR1C8PQ5T2L2 129 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 KCNRGQ8N5I3 272 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 SAV1Q9H4B6 383 aaPredicted RBP6.97□□□□□ -1.29
USP54-215ENST00000497106 LPAR2Q9HBW0 351 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 PSENENQ9NZ42 101 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 WIPF3A6NGB9 483 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 SSSCA1O60232 199 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 SCO1O75880 301 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 S100A7P31151 101 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 UQCRFS1P47985 274 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 AKR1D1P51857 326 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 ERHP84090 104 aaKnown RBP6.97□□□□□ -1.29
USP54-215ENST00000497106 MORN2Q502X0 79 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 MIDNQ504T8 468 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 FAM201AQ5SY85 155 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 HEPN1Q6WQI6 88 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 S100A7AQ86SG5 101 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 TMEM204Q9BSN7 226 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 LAMA3Q16787 3333 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 TMEM238LA0A1B0GVL6 79 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 NUDT19A8MXV4 375 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 SPDEFO95238 335 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 F12P00748 615 aaPredicted RBP6.97□□□□□ -1.29
USP54-215ENST00000497106 OR2B11Q5JQS5 317 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 LYZL2Q7Z4W2 148 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 DTX2Q86UW9 622 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 FAM168AQ92567 244 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 TMEM230Q96A57 120 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 RPUSD1Q9UJJ7 312 aaKnown RBP6.97□□□□□ -1.29
USP54-215ENST00000497106 GAB2Q9UQC2 676 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 WASHC3Q9Y3C0 194 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 GTF3C1Q12789 2109 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 A0A1W2PN81 502 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 M0R1W7 72 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 KRASP01116 189 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 IFNA1P01562 189 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 IFNA10P01566 189 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 CHRNA7P36544 502 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 ATP5IP56385 69 aaPredicted RBP6.97□□□□□ -1.29
USP54-215ENST00000497106 CRIP3Q6Q6R5 217 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 MOB3BQ86TA1 216 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 STOML3Q8TAV4 291 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 NEUROG1Q92886 237 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 FLYWCH2Q96CP2 140 aaKnown RBP6.97□□□□□ -1.29
USP54-215ENST00000497106 ZNF251Q9BRH9 671 aa6.97□□□□□ -1.29
USP54-215ENST00000497106 PATZ1Q9HBE1 687 aaKnown RBP6.97□□□□□ -1.29
USP54-215ENST00000497106 PLAUP00749 431 aa6.96□□□□□ -1.29
USP54-215ENST00000497106 SELLP14151 372 aa6.96□□□□□ -1.29
USP54-215ENST00000497106 RAB5CP51148 216 aa6.96□□□□□ -1.29
USP54-215ENST00000497106 SRSF4Q08170 494 aaKnown RBP6.96□□□□□ -1.29
USP54-215ENST00000497106 PLEKHA3Q9HB20 300 aa6.96□□□□□ -1.29
USP54-215ENST00000497106 TNFSF18Q9UNG2 199 aa6.96□□□□□ -1.29
USP54-215ENST00000497106 MED12LQ86YW9 2145 aa6.96□□□□□ -1.29
USP54-215ENST00000497106 PTPRQQ9UMZ3 2332 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 BTBD17A6NE02 478 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 SYNGR2O43760 224 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 ABHD12Q8N2K0 398 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 C9orf62Q8N4C0 152 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 OR10P1Q8NGE3 313 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 RNF141Q8WVD5 230 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 SLC25A32Q9H2D1 315 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 C1RLQ9NZP8 487 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 NCOA6Q14686 2063 aaPredicted RBP6.96□□□□□ -1.3
USP54-215ENST00000497106 CLN5O75503 358 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 MT-CO2P00403 227 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 WNT2P09544 360 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 COX7A1P24310 79 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 OR2C3Q8N628 320 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 ABHD5Q8WTS1 349 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 GLYATL2Q8WU03 294 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 C18orf12Q96KH6 178 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 DCTN5Q9BTE1 182 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 IFNA4P05014 189 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 CAMLGP49069 296 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 PDPNQ86YL7 162 aa6.96□□□□□ -1.3
USP54-215ENST00000497106 MRGPRFQ96AM1 343 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms